Factsheet for HORVU2Hr1G005630.19

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G051700.1	Wheat	cytosol, peroxisome, plasma membrane	44.42	50.81
TraesCS2A01G039300.2	Wheat	cytosol, peroxisome, plasma membrane	44.07	49.21
AT5G60580.4	Thale cress	cytosol, nucleus, peroxisome	9.2	10.53
VIT_06s0004g02930.t01	Wine grape	cytosol, peroxisome, plasma membrane	9.2	10.48
CDY67417	Canola	endoplasmic reticulum, plasma membrane	9.03	9.98
CDY31533	Canola	cytosol, nucleus, plasma membrane	8.67	9.84
Bra002470.1-P	Field mustard	cytosol, nucleus, plasma membrane	8.32	9.79
CDY09194	Canola	cytosol, peroxisome, plasma membrane	8.14	9.6
Bra020240.1-P	Field mustard	cytosol, peroxisome, plasma membrane	8.14	9.35
KRH22901	Soybean	cytosol	7.08	8.46
HORVU0Hr1G022270.4	Barley	plastid	5.66	5.85
HORVU6Hr1G001690.9	Barley	cytosol, nucleus	4.07	5.0

Protein Annotations

MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	UniProt:A0A287GYX3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0008270	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	EnsemblPlantsGene:HORVU2Hr1G005630	EnsemblPlants:HORVU2Hr1G005630.19
InterPro:IPR011016	InterPro:IPR013083	InterPro:MARCH-like	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR23012
PANTHER:PTHR23012:SF25	SMART:SM00744	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000B4704D9	InterPro:Znf_RING-CH
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:12212405..12215567

Molecular Weight (calculated)

59724.3 Da

IEP (calculated)

9.466

GRAVY (calculated)

-0.228

Length

565 amino acids

Sequence
(BLAST)

001: CQPNRLRHLQ SSPPPRSTSH PQLCTHLPPF PTNLRQRERE GVSSCPRPAM DSPRMEQESS GGGTGSATIT NPMQGGVGGG CPAPDDQQAK RPPHLSIDIP
101: AASPSSVPPT PTASAEAEAV AATPGSNASR TPGSGSGSGS GKNGAPAKPP APQRTPSFML RQTVRSLLPG GGSFKSSVRG YEASLSRLFS GRIARTASLP
201: AVDDGALSAS AHGAGDKTQQ SVPAAAADKT GMHRSQSLPM NMKKLSSAKS IKRMNSLGGV YRVVPSTPRA PAAAAATSNA APDIVPTEPG AGEEEDDHGE
301: DIAEEEAVCR ICMVELSEGG GAMKLECACR GELALAHTDC ALKWFGIKAT RTCEVCKEEV KNLPVTLLRV QSTRGGGEAA TRAGANRPRY VRYRLWHGTP
401: ILVVISILAY FCFLEQLLVA HNGFAALAIS LPFSCILGLF SSLTTTSMVA RRYVWIYAAI QFLFVVFFTH LFYRYLHLQA VISIILATFA GFGVGMIGNS
501: IIIEVLRWRT MAPAQQRRAR RPPRVAQQQQ QPAPAHSQPS GQLSDAGEGQ RSATVDIENP AAPQA

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.