Factsheet for TraesCS2B01G051700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G005630.19	Barley	mitochondrion	50.81	44.42
TraesCS2A01G039300.2	Wheat	cytosol, peroxisome, plasma membrane	45.14	44.07
AT5G60580.4	Thale cress	cytosol, nucleus, peroxisome	10.53	10.53
VIT_06s0004g02930.t01	Wine grape	cytosol, peroxisome, plasma membrane	10.32	10.28
CDY09194	Canola	cytosol, peroxisome, plasma membrane	9.72	10.02
Bra020240.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.51	9.55
CDY67417	Canola	endoplasmic reticulum, plasma membrane	9.72	9.39
Bra002470.1-P	Field mustard	cytosol, nucleus, plasma membrane	8.91	9.17
CDY31533	Canola	cytosol, nucleus, plasma membrane	9.11	9.04
KRH22901	Soybean	cytosol	7.89	8.25
TraesCS7B01G363900.1	Wheat	cytosol, nucleus, plasma membrane	5.47	5.59
TraesCS6B01G005200.1	Wheat	cytosol, nucleus, plasma membrane	4.05	4.39

Protein Annotations

EnsemblPlants:TraesCS2B01G051700.1	EnsemblPlantsGene:TraesCS2B01G051700	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0008270
InterPro:IPR011016	InterPro:IPR013083	InterPro:MARCH-like	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR23012
PANTHER:PTHR23012:SF25	PFAM:PF12906	PFscan:PS51292	SEG:seg	SMART:SM00744	SUPFAM:SSF57850
TIGR:cd16495	TMHMM:TMhelix	MapMan:19.2.2.1.5.3.4	:	:	:

Description

No Description!

Coordinates

chr2B:-:25257102..25259849

Molecular Weight (calculated)

52295.7 Da

IEP (calculated)

9.114

GRAVY (calculated)

-0.115

Length

494 amino acids

Sequence
(BLAST)

001: MDSPRMEQES TSTTITNPMQ GGGGGGGGGP APDDQRDKRP PHLSIDIPAA TSAPLTPTAA AEPEAVAATP GSGSGRNGSP ATKPPAPQRT PSFMLRQTVR
101: SLLPGGGSFK SSVRGYEASL SRLFSGRIAR TSSLPAADHA ALSASVHAAD KTPPSVPAAA ADKTGMHRSQ SLPMNMKKLS SAKSIKRMNS LGGVYRVVPS
201: TPRAPAATTA ASNAAMPDIV PTEPGAGEEE DDHGEDIAEE EAVCRICMVE LSEGGGAMKL ECSCRGELAL AHTDCALKWF GIKGTRTCEV CKQEVQNLPV
301: TLLRVQSTRG GGDASRAGAT GPRHVRYRLW HGTPILVIIS ILAYFCFLEQ LLVAHNGFAA LAISLPFSCI LGLFSSLTTT SMVARRYVWI YAAIQFLFVV
401: FFTHLFYRYL HLQAVISIIL ATFAGFGVGM IGNSIIIEVL RWRTMAPAQP RRARRPPRVA QQQHPAPTSS HPSAAEEGQR SATVDVENPA IPQA

Best Arabidopsis Sequence Match ( AT3G09760.1 )
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Arabidopsis Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.