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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G001690.9 Barley cytosol, nucleus 0.0 0.0
VIT_12s0028g01200.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 0.0 0.0
VIT_08s0040g01950.t01 Wine grape cytosol, nucleus, plasma membrane 0.0 0.0
VIT_06s0004g02930.t01 Wine grape cytosol, peroxisome, plasma membrane 0.0 0.0
VIT_05s0020g02080.t01 Wine grape cytosol 0.0 0.0
TraesCS6D01G005100.1 Wheat plasma membrane 0.0 0.0
TraesCS6A01G001000.1 Wheat cytosol, nucleus, plasma membrane 0.0 0.0
Solyc09g007680.2.1 Tomato cytosol, nucleus, plasma membrane 0.0 0.0
PGSC0003DMT400004459 Potato cytosol, nucleus, plasma membrane 0.0 0.0
KRG90054 Soybean cytosol, peroxisome, vacuole 0.0 0.0
AT3G06330.1 Thale cress cytosol 0.0 0.0
CDY24702 Canola cytosol 0.0 0.0
CDY18852 Canola cytosol 0.0 0.0
CDY08057 Canola cytosol, peroxisome, plasma membrane 0.0 0.0
CDY05254 Canola cytosol 0.0 0.0
CDX74109 Canola cytosol, peroxisome, plasma membrane 0.0 0.0
Bra040226.1-P Field mustard cytosol 0.0 0.0
Bra020758.1-P Field mustard cytosol 0.0 0.0
Bra001193.1-P Field mustard cytosol 0.0 0.0
Protein Annotations
ArrayExpress:VIT_12s0034g00630EnsemblPlants:VIT_12s0034g00630.t01EnsemblPlantsGene:VIT_12s0034g00630SEG:segUniParc:UPI0001BE23BDMapMan:35.2
Description
No Description!
Coordinates
chr12:-:16341929..16348554
Molecular Weight (calculated)
1028.2 Da
IEP (calculated)
7.552
GRAVY (calculated)
-0.013
Length
1594 amino acids
Sequence
(BLAST)
0001: MRRDQEHXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.