Factsheet for AT3G06330.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18852	Canola	cytosol	56.1	55.2
CDY05254	Canola	cytosol	57.28	54.83
CDY24702	Canola	cytosol	34.04	32.81
Bra020758.1-P	Field mustard	cytosol	34.04	32.73
CDY08057	Canola	cytosol, peroxisome, plasma membrane	31.92	31.12
Bra001193.1-P	Field mustard	cytosol	31.69	30.96
CDX74109	Canola	cytosol, peroxisome, plasma membrane	31.46	30.66
Bra040226.1-P	Field mustard	cytosol	24.88	25.18
AT5G18760.1	Thale cress	plastid	11.74	12.17
HORVU6Hr1G001690.9	Barley	cytosol, nucleus	4.69	4.35
TraesCS6A01G001000.1	Wheat	cytosol, nucleus, plasma membrane	4.23	4.09
TraesCS6D01G005100.1	Wheat	plasma membrane	4.23	3.85
AT5G60580.4	Thale cress	cytosol, nucleus, peroxisome	4.23	3.64
AT3G09760.1	Thale cress	nucleus	3.52	3.05
AT5G03180.2	Thale cress	nucleus	3.29	3.0
KRG90054	Soybean	cytosol, peroxisome, vacuole	3.05	2.74
VIT_12s0034g00630.t01	Wine grape	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	EntrezGene:819807	ProteinID:AAF08580.1	ProteinID:AEE74375.1	EMBL:AF428443
ProteinID:ANM65614.1	ArrayExpress:AT3G06330	EnsemblPlantsGene:AT3G06330	RefSeq:AT3G06330	TAIR:AT3G06330	RefSeq:AT3G06330-TAIR-G
EnsemblPlants:AT3G06330.1	TAIR:AT3G06330.1	EMBL:AY133573	Unigene:At.20572	EMBL:DQ086840	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0046872	InterPro:IPR011016	InterPro:IPR013083	InterPro:MARCH-like
RefSeq:NP_001327571.1	RefSeq:NP_566281.1	PFAM:PF12906	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51292
PANTHER:PTHR23012	PANTHER:PTHR23012:SF84	UniProt:Q9SQT6	SMART:SM00744	SUPFAM:SSF57850	TMHMM:TMhelix
UniParc:UPI00000A957D	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT3g06330/F24P17_21 [Source:UniProtKB/TrEMBL;Acc:Q9SQT6]

Coordinates

chr3:+:1917131..1919959

Molecular Weight (calculated)

46713.1 Da

IEP (calculated)

8.532

GRAVY (calculated)

-0.080

Length

426 amino acids

Sequence
(BLAST)

001: MKMQDSAAQE PEIAIIVGDS SSSSLHSSSQ VTEKSTEDVP SCSHLDLSIQ IPSRSLPFGN GRNPKGSLKS TPSFKSGTTS SPRGILRNLS LKKKVISQPE
101: SERSSLLSPG LMETAKKPNA TGSTTSPYWK RCLSLPSRQA AKLSPVVSTQ LSAGVPGDPP NKDYSRSLSM PGRNKVIVRS ISFDNHKARV SSETSADQVS
201: SVPPEETDEE IPEEEAVCRI CLDVCEEGNT LKMECSCKGD LRLVHEACAM KWFSTKGTRT CDVCRQVVQN LPVTLVRVPT PNQQNNRRGS SQQNMPSQTV
301: SAWQEFVVLV LISTVCYFFF LEQLLIRDLN KQAIYIAAPF SLTLGLLASI FAIVLAIREY IWTYAALEFA LVGMLVHIFY ATVRLSATYS ILFAGILGFG
401: IAVCLNSLYL HYFAWRVRVA QNSSPV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.