Factsheet for AT3G09760.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004459	Potato	cytosol, nucleus, plasma membrane	18.94	18.02
Solyc09g007680.2.1	Tomato	cytosol, nucleus, plasma membrane	17.11	16.22
AT5G03180.2	Thale cress	nucleus	6.52	6.87
TraesCS6A01G001000.1	Wheat	cytosol, nucleus, plasma membrane	4.07	4.55
TraesCS6D01G005100.1	Wheat	plasma membrane	4.28	4.5
AT5G60580.4	Thale cress	cytosol, nucleus, peroxisome	4.48	4.45
HORVU6Hr1G001690.9	Barley	cytosol, nucleus	3.87	4.13
AT3G06330.1	Thale cress	cytosol	3.05	3.52
AT5G18760.1	Thale cress	plastid	2.85	3.41

Protein Annotations

MapMan:19.2.2.1.5.3.4	Gene3D:3.30.40.10	EntrezGene:820134	ProteinID:AEE74809.1	ArrayExpress:AT3G09760	EnsemblPlantsGene:AT3G09760
RefSeq:AT3G09760	TAIR:AT3G09760	RefSeq:AT3G09760-TAIR-G	EnsemblPlants:AT3G09760.1	TAIR:AT3G09760.1	EMBL:AY054231
EMBL:AY113176	Unigene:At.26390	EMBL:DQ059112	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0008270	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	InterPro:IPR011016	InterPro:IPR013083
InterPro:MARCH-like	RefSeq:NP_566355.1	PFAM:PF12906	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PFscan:PS51292	PANTHER:PTHR23012	PANTHER:PTHR23012:SF92	UniProt:Q940P1	SMART:SM00744	SUPFAM:SSF57850
TMHMM:TMhelix	UniParc:UPI00000A89B4	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

At3g09760/F8A24.19 [Source:UniProtKB/TrEMBL;Acc:Q940P1]

Coordinates

chr3:-:2992654..2995694

Molecular Weight (calculated)

54130.6 Da

IEP (calculated)

8.805

GRAVY (calculated)

-0.318

Length

491 amino acids

Sequence
(BLAST)

001: MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL
101: SPSSSTSSSS RNKPNSLKNL IPKLSFKNRN SNNDNVDIEK AADLGFVSSP SSGNGRDRST WTLTNILTPR LKKTESLPVT PIAHSNPEST HGRFAVDLVT
201: STKKGPPLPI HRSRSVPAFN KDGSQRQLGV FRVIPTPNMS PTRNTIKLND ANVDGAEDVP EEEAVCRICL VELGEDSEAF KMECLCRGEL ALAHKECTIK
301: WFTIKGNRTC DVCKQEVQNL PVTLLRMQNS RGSIGAPDAE AAHYSLWQDV PILVIVSMLA YFCFLEQLLL TKMQSGAIAV SLPFSCVLGL FASMTATTMV
401: PKRYVWIYAT TQFGLVVFFS HIFFTLVRMQ PVVAILLATI VGFGLTMSGT TGIVEFSKWR RSNRTAELPS SSQVDQPLVE TTDQNISGSR N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.