Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003674_P001 | Maize | extracellular | 57.83 | 17.78 |
| KRH04597 | Soybean | cytosol | 79.52 | 15.57 |
| KRH57934 | Soybean | cytosol, nucleus | 79.52 | 11.85 |
| CDY63965 | Canola | cytosol | 71.08 | 11.35 |
| GSMUA_Achr11P... | Banana | cytosol | 68.67 | 11.0 |
| Bra039198.1-P | Field mustard | cytosol | 71.08 | 10.61 |
| CDY46076 | Canola | cytosol | 71.08 | 10.61 |
| AT2G23420.1 | Thale cress | cytosol | 71.08 | 10.59 |
| Solyc03g044430.2.1 | Tomato | cytosol | 69.88 | 10.25 |
| PGSC0003DMT400010254 | Potato | cytosol | 68.67 | 10.22 |
| Solyc02g093290.2.1 | Tomato | cytosol, extracellular, nucleus | 68.67 | 10.22 |
| VIT_07s0031g00460.t01 | Wine grape | cytosol | 68.67 | 10.16 |
| Bra017808.1-P | Field mustard | cytosol | 63.86 | 10.08 |
| GSMUA_Achr2P08220_001 | Banana | cytosol | 65.06 | 10.07 |
| CDY66512 | Canola | cytosol | 66.27 | 9.89 |
| CDY29537 | Canola | cytosol | 66.27 | 9.79 |
| Zm00001d034777_P005 | Maize | cytosol | 65.06 | 9.69 |
| AT4G36940.1 | Thale cress | cytosol | 65.06 | 9.66 |
| Os03t0837300-02 | Rice | plasma membrane | 63.86 | 9.46 |
| OQU90665 | Sorghum | peroxisome | 63.86 | 9.36 |
| KRH77015 | Soybean | cytosol | 61.45 | 9.14 |
| TraesCS4A01G354500.1 | Wheat | peroxisome | 62.65 | 9.01 |
| TraesCS5B01G517900.3 | Wheat | peroxisome | 62.65 | 9.01 |
| TraesCS5D01G517600.1 | Wheat | peroxisome | 61.45 | 8.84 |
| KXG26318 | Sorghum | cytosol, plastid | 60.24 | 8.77 |
| Os04t0429800-01 | Rice | plasma membrane, plastid | 59.04 | 8.7 |
| TraesCS2A01G302400.1 | Wheat | cytosol, peroxisome, plastid | 59.04 | 8.66 |
| TraesCS2B01G318300.2 | Wheat | cytosol, peroxisome, plastid | 59.04 | 8.66 |
| TraesCS2D01G301100.1 | Wheat | golgi | 59.04 | 8.66 |
| Zm00001d025412_P001 | Maize | plastid | 59.04 | 7.61 |
| KRH28456 | Soybean | extracellular | 9.64 | 4.23 |
| Zm00001d003675_P001 | Maize | plastid | 6.02 | 2.24 |
| HORVU2Hr1G074990.1 | Barley | plastid | 2.41 | 1.9 |
Protein Annotations
| KEGG:00760+6.3.4.21 | Gene3D:3.20.140.10 | MapMan:35.1 | UniProt:A0A0R0K983 | EMBL:ACUP02002664 | EnsemblPlantsGene:GLYMA_04G168100 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004514 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009435 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlants:KRH63322 | ProteinID:KRH63322 |
| ProteinID:KRH63322.1 | InterPro:Nic_PRibTrfase-Fam | InterPro:Nicotinate_pribotase_like_C | PANTHER:PTHR11098 | PANTHER:PTHR11098:SF17 | MetaCyc:PWY-5381 |
| SUPFAM:SSF51690 | UniParc:UPI0006ED872B | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:42174898..42175537
Molecular Weight (calculated)
9956.2 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.124
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MQLMTVNFYF SIVTCLFFFE DIKKDTLPAL RDIREQCINQ LEQMRPDHMR RLNPTPYKVS VSAKLYDFIH FLWLNEAPVG ELQ
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
Arabidopsis Description
NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.