CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04818
KRH16185
KRH24392
KRH29374
KRH51475
KRH52631
KRH60786
KRH61972

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	KRH04818	AT2G24400.1	21798944
AT4G33920.1	KRH16185	AT2G24400.1	21798944
AT4G33920.1	KRH52631	AT2G24400.1	21798944
AT4G33920.1	KRH61972	AT2G24400.1	21798944
AT4G33920.1	KRH24392	AT4G39050.1	21798944
AT4G33920.1	KRH29374	AT4G39050.1	21798944
AT4G33920.1	KRH51475	AT4G39050.1	21798944
AT4G33920.1	KRH60786	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91074	Soybean	cytosol, mitochondrion	94.18	95.44
GSMUA_Achr6P11170_001	Banana	cytosol	73.02	73.4
AT4G33920.1	Thale cress	mitochondrion	71.69	71.32
CDX72438	Canola	mitochondrion	70.37	71.12
GSMUA_Achr4P14220_001	Banana	mitochondrion	70.11	71.05
Bra036972.1-P	Field mustard	mitochondrion	70.11	70.86
KRH28403	Soybean	cytosol	70.11	70.67
Bra034592.1-P	Field mustard	mitochondrion	71.69	70.39
CDY49385	Canola	mitochondrion	69.58	70.32
CDY28332	Canola	mitochondrion	71.43	70.31
CDY51944	Canola	mitochondrion	71.43	70.13
GSMUA_Achr3P02220_001	Banana	mitochondrion	69.31	69.68
KRH77072	Soybean	cytosol	69.05	69.23
GSMUA_Achr2P21550_001	Banana	mitochondrion	69.58	68.13
HORVU5Hr1G018930.2	Barley	mitochondrion	67.72	66.84
Os12t0580900-01	Rice	mitochondrion	69.31	66.84
TraesCS5D01G085200.1	Wheat	mitochondrion	66.93	66.06
TraesCS5B01G078500.1	Wheat	mitochondrion	66.93	66.06
TraesCS5A01G072500.1	Wheat	mitochondrion	66.14	65.27
Zm00001d048131_P001	Maize	cytosol	61.9	59.85
EER95306	Sorghum	mitochondrion	60.85	58.67
Os03t0207400-01	Rice	mitochondrion	59.79	57.65
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	57.94	56.3
TraesCS4B01G254700.1	Wheat	plastid	58.47	51.88
TraesCS4A01G050000.1	Wheat	plastid	58.47	51.64
KRH71850	Soybean	mitochondrion	49.21	50.82
HORVU4Hr1G069380.3	Barley	peroxisome	31.75	50.21
KRH67612	Soybean	cytosol	47.35	50.14
KRH38102	Soybean	mitochondrion	51.06	50.13
KRG90665	Soybean	mitochondrion	52.38	49.87
KRH36089	Soybean	cytosol	52.38	49.87
KRH69725	Soybean	mitochondrion	51.85	49.75
KRH07984	Soybean	mitochondrion	51.59	49.49
KRH50715	Soybean	mitochondrion, peroxisome, plastid	48.94	49.47
KRG93033	Soybean	mitochondrion	50.53	49.23
KRH02370	Soybean	cytosol, extracellular, plastid	48.68	49.07
KRH36962	Soybean	cytosol	48.15	48.66
KRH11926	Soybean	cytosol	47.88	48.66
KRG95894	Soybean	cytosol	47.62	48.65
KRH36281	Soybean	mitochondrion	50.0	48.59
KRH19775	Soybean	cytosol	47.62	48.52
KRH32367	Soybean	cytosol	47.35	48.25
KRG95384	Soybean	mitochondrion	48.94	47.31
KRH37115	Soybean	cytosol, nucleus, peroxisome	23.28	21.52
KRH50856	Soybean	cytosol, nucleus, peroxisome	26.19	19.04
KRH02249	Soybean	cytosol, nucleus, peroxisome	25.93	18.7
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	27.51	17.28
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	27.25	17.25
KRH58222	Soybean	cytosol, nucleus, peroxisome	27.78	15.09
KRH29800	Soybean	cytosol, nucleus, plastid	28.57	15.0
KRH24796	Soybean	nucleus	28.57	15.0
KRH04317	Soybean	cytosol, nucleus, plastid	27.78	14.98
KRH28277	Soybean	plastid	28.04	14.34
KRH77217	Soybean	plastid	28.04	14.08
KRH68360	Soybean	cytosol, nucleus, peroxisome	29.1	12.4
KRG96628	Soybean	cytosol, nucleus, peroxisome	28.57	12.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100812137	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EMBL:ACUP02006700
EnsemblPlantsGene:GLYMA_10G259400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1LEG7	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH35699	ProteinID:KRH35699	ProteinID:KRH35699.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF362
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233CDDD	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:48531124..48534411

Molecular Weight (calculated)

42454.8 Da

IEP (calculated)

8.151

GRAVY (calculated)

-0.233

Length

378 amino acids

Sequence
(BLAST)

001: MLRLCYGPLD CCFRRRRADG LLWHTDLKPH ASGDFSIAVA QANYCLEDQS QVFTSPYATY VGVYDGHGGP EASRFVNKRL FPYLHKFATE QGGLSVDVIK
101: KAFSATEEEF LHLVKLSLPI SPQIASVGSC CLFGAISNNV LYVANLGDSR AVLGRRDTVR KNSPVVAQRL STDHNVADEE VRKEVEALHP DDSHIVVYNR
201: GVWRIKGIIQ VSRSIGDVYL KKPDFYRDPV FQQFGNPIPL KRPVMTAEPS IIIRELESQD LFLIFASDGL WEQLSDEAAV QIVFKHPRAG IAKRLVRAAL
301: HEAAKKREMR YDDIKKIDKG IRRHFHDDIT VVVIYLDHHA GSSNGRFKQT GVDYTTAPVD IFSLNADEAE KRMLGTVA

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.