Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G047110.10 | |
| HORVU2Hr1G100360.1 | |
| HORVU7Hr1G096880.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33920.1 | HORVU2Hr1G100360.1 | AT2G24400.1 | 21798944 |
| AT4G33920.1 | HORVU7Hr1G096880.1 | AT2G24400.1 | 21798944 |
| AT4G33920.1 | HORVU1Hr1G047110.10 | AT4G39050.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G254500.1 | Wheat | mitochondrion, nucleus, plastid, vacuole | 78.24 | 48.07 |
| TraesCS4B01G254700.1 | Wheat | plastid | 79.08 | 44.37 |
| TraesCS4A01G050000.1 | Wheat | plastid | 76.57 | 42.76 |
| Os03t0207400-01 | Rice | mitochondrion | 66.11 | 40.31 |
| Zm00001d048131_P001 | Maize | cytosol | 63.6 | 38.87 |
| EER95306 | Sorghum | mitochondrion | 63.18 | 38.52 |
| KRG91074 | Soybean | cytosol, mitochondrion | 50.21 | 32.17 |
| PGSC0003DMT400066175 | Potato | cytosol | 50.21 | 32.0 |
| KRH35699 | Soybean | mitochondrion | 50.21 | 31.75 |
| HORVU5Hr1G018930.2 | Barley | mitochondrion | 50.21 | 31.33 |
| PGSC0003DMT400013942 | Potato | cytosol, mitochondrion | 48.54 | 31.27 |
| VIT_03s0091g00470.t01 | Wine grape | mitochondrion | 49.79 | 31.23 |
| CDY28332 | Canola | mitochondrion | 49.37 | 30.73 |
| KRH28403 | Soybean | cytosol | 48.12 | 30.67 |
| Bra034592.1-P | Field mustard | mitochondrion | 49.37 | 30.65 |
| CDY51944 | Canola | mitochondrion | 49.37 | 30.65 |
| Solyc02g092750.2.1 | Tomato | cytosol | 46.86 | 30.6 |
| Solyc01g107300.2.1 | Tomato | cytosol | 29.29 | 30.57 |
| Solyc10g049630.1.1 | Tomato | mitochondrion, nucleus | 48.54 | 30.53 |
| VIT_07s0129g00520.t01 | Wine grape | cytosol | 48.95 | 30.47 |
| PGSC0003DMT400064207 | Potato | cytosol | 46.86 | 30.11 |
| AT4G33920.1 | Thale cress | mitochondrion | 47.7 | 30.0 |
| KRH77072 | Soybean | cytosol | 47.28 | 29.97 |
| Bra036972.1-P | Field mustard | mitochondrion | 46.86 | 29.95 |
| Solyc01g107310.2.1 | Tomato | mitochondrion | 23.01 | 29.73 |
| CDX72438 | Canola | mitochondrion | 46.44 | 29.68 |
| CDY49385 | Canola | mitochondrion | 46.44 | 29.68 |
| VIT_18s0001g09390.t01 | Wine grape | mitochondrion | 44.77 | 28.31 |
| HORVU2Hr1G009490.1 | Barley | mitochondrion | 17.99 | 27.22 |
| HORVU3Hr1G117670.6 | Barley | mitochondrion | 42.26 | 25.57 |
| HORVU5Hr1G097060.3 | Barley | plastid | 41.42 | 25.45 |
| HORVU4Hr1G080570.1 | Barley | mitochondrion | 42.26 | 25.31 |
| HORVU2Hr1G104630.4 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 41.0 | 25.13 |
| HORVU5Hr1G116740.1 | Barley | cytosol, peroxisome | 29.71 | 24.83 |
| HORVU7Hr1G117970.1 | Barley | mitochondrion | 40.59 | 24.74 |
| HORVU1Hr1G052770.6 | Barley | nucleus, peroxisome, plastid | 41.0 | 24.56 |
| HORVU4Hr1G020150.2 | Barley | peroxisome | 30.54 | 23.03 |
| HORVU3Hr1G114160.1 | Barley | mitochondrion | 29.29 | 22.51 |
| HORVU2Hr1G009260.1 | Barley | mitochondrion | 13.39 | 16.08 |
| HORVU2Hr1G071850.2 | Barley | nucleus | 25.94 | 11.95 |
| HORVU6Hr1G066850.2 | Barley | plastid | 22.59 | 9.05 |
| HORVU5Hr1G113240.1 | Barley | plastid | 23.85 | 8.91 |
| HORVU4Hr1G090650.1 | Barley | cytosol, nucleus, peroxisome, plastid | 21.76 | 8.48 |
| HORVU1Hr1G005090.6 | Barley | mitochondrion | 21.34 | 8.21 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | EnsemblPlantsGene:HORVU4Hr1G069380 | EnsemblPlants:HORVU4Hr1G069380.3 |
| InterPro:IPR001932 | InterPro:IPR036457 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF361 | SMART:SM00332 | SUPFAM:SSF81606 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:570486980..570488044
Molecular Weight (calculated)
22448.8 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.123
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVGLKAHAS GEYSVAVAQA NEALEDQAQV LVSPASTLVG VYDGHGGPDA ARFVNARLFS LIQELASQSG
101: GLSAQVIKRA FGATEEEFMG MVEKSWPSQP RLMSVGSCCL VGAIEDGTLD GLWEQLSDDA AVGIVSRSPR KGVAMRLVRA AQLEAARKKD MRYESIAAIE
201: KGRRRRFHDD ITVVVLFLDN RCEARSDNNR NHYPVMTIV
101: GLSAQVIKRA FGATEEEFMG MVEKSWPSQP RLMSVGSCCL VGAIEDGTLD GLWEQLSDDA AVGIVSRSPR KGVAMRLVRA AQLEAARKKD MRYESIAAIE
201: KGRRRRFHDD ITVVVLFLDN RCEARSDNNR NHYPVMTIV
001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY
Arabidopsis Description
Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.