Factsheet for HORVU4Hr1G090650.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G381900.1	Wheat	plastid	76.84	77.34
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	75.53	76.53
TraesCS4B01G382400.1	Wheat	cytosol	29.04	75.42
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	74.71	75.33
Os03t0275100-02	Rice	cytosol, peroxisome, plastid	61.01	59.27
Zm00001d028615_P001	Maize	nucleus	59.54	58.59
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	58.56	58.18
Zm00001d047807_P001	Maize	cytosol	58.08	57.98
OQU92823	Sorghum	plastid	49.1	56.05
HORVU5Hr1G113240.1	Barley	plastid	41.27	39.53
HORVU6Hr1G066850.2	Barley	plastid	34.58	35.51
HORVU1Hr1G005090.6	Barley	mitochondrion	34.58	34.14
HORVU2Hr1G071850.2	Barley	nucleus	24.63	29.09
HORVU7Hr1G117970.1	Barley	mitochondrion	18.6	29.08
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	13.38	28.67
HORVU3Hr1G114160.1	Barley	mitochondrion	13.7	27.01
HORVU3Hr1G117670.6	Barley	mitochondrion	16.97	26.33
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	17.13	26.32
HORVU4Hr1G020150.2	Barley	peroxisome	13.54	26.18
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	16.48	25.9
HORVU4Hr1G080570.1	Barley	mitochondrion	16.31	25.06
HORVU5Hr1G018930.2	Barley	mitochondrion	15.33	24.54
HORVU4Hr1G069380.3	Barley	peroxisome	8.48	21.76
HORVU5Hr1G097060.3	Barley	plastid	13.38	21.08
HORVU2Hr1G009490.1	Barley	mitochondrion	4.89	18.99
HORVU2Hr1G009260.1	Barley	mitochondrion	3.43	10.55

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G090650	EnsemblPlants:HORVU4Hr1G090650.1	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0VSN9	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002957B5E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:645763892..645766806

Molecular Weight (calculated)

67359.8 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.331

Length

613 amino acids

Sequence
(BLAST)

001: MGNGITKNSG NTSASVVSSD QVPGDIHGNS FMYVPIAIAF NKSPMGTVLS SKTPFFSLFG AAINANQATS SSMPSFRLLN ELMGPQSSGC TVKSSCSFAA
101: APLLQATPTR SSMYGRFFNS SGTASTIANQ LAGRPFMSGM LDRSFSSSSS FVSHQPSVSH LMVEHGAMSS RRCNERPIDK FLDASASKLD FRVPHNKLLS
201: EGPTEASVMD SSSNGNHHSP PSHNVQWTQG MAGEDRFQVA LSEEHGWVFV GIYDGFIGPD ATDYLFANLH VAVHHALKGV LWDNIQCNEP ATTADHLFFL
301: DGGNHSPEFD RKPAKRGRTE HREADNSATS GGNLPMHDEV LKALEQALRE TEEAFFEAAE QGAADNPEIG LMGSCVLVML MKGEDVYVMN VGDSRAMLVS
401: RREPSRNNIH GKVVAQDLQQ SKTKIMHSHD MGGLQSVQLN AEHNTSVEEE VKRIKGEHLD DRNAIIYGKV KGKLSVTRAF GAGYLKEPKW NNRLLASFKI
501: DYIGEEPYIN CIPSLCHHRI GPNDKFLVLS SDGLYQYFTN KEVVNMVEMF TAMFPEGNPA HHLVVELLLR AARKAGMDYD ELLKIPHYER RMYHDDVSVI
601: VISFKGGMWR SSV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.