Factsheet for TraesCS4B01G382400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G381900.1	Wheat	plastid	86.02	33.33
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	82.2	31.91
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	81.36	31.74
OQU92823	Sorghum	plastid	66.53	29.24
HORVU4Hr1G090650.1	Barley	cytosol, nucleus, peroxisome, plastid	75.42	29.04
Zm00001d047807_P001	Maize	cytosol	66.95	25.73
Zm00001d028615_P001	Maize	nucleus	66.95	25.36
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	66.1	25.28
Os03t0275100-02	Rice	cytosol, peroxisome, plastid	65.68	24.56
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	54.66	20.57
TraesCS6B01G290600.1	Wheat	plastid	48.73	19.26
TraesCS7B01G455500.1	Wheat	mitochondrion	29.66	17.86
TraesCS4B01G335500.1	Wheat	mitochondrion	29.24	17.25
TraesCS3B01G604000.1	Wheat	mitochondrion	27.97	17.1
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	28.39	17.09
TraesCS5B01G404000.2	Wheat	mitochondrion	26.27	16.49
TraesCS5B01G078500.1	Wheat	mitochondrion	25.85	15.93
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	25.42	15.71
TraesCS2B01G307000.1	Wheat	nucleus	33.47	15.22
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	25.0	15.13
TraesCS4B01G254700.1	Wheat	plastid	27.12	15.02
TraesCS1B01G042100.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	36.44	13.78
TraesCS3B01G094100.1	Wheat	cytosol	25.0	7.67

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4B01G382400	EnsemblPlants:TraesCS4B01G382400.1	TIGR:cd00143	:	:

Description

No Description!

Coordinates

chr4B:-:661680808..661682247

Molecular Weight (calculated)

26950.7 Da

IEP (calculated)

8.756

GRAVY (calculated)

-0.336

Length

236 amino acids

Sequence
(BLAST)

001: MGSCVLVMLM KGEDVHVMNI GDSRVVLARR RDPDLNNILG KATPKDLQQL KAEIMDGLQS VQFNDEHNTS VEEEVKRITV EHTDSNAIIH GRVKGKLNIT
101: RAFGAGYLKE PKWNSVLLPS FKIDYIGKGP YIICIPSLHH YRIGPNDQFL VLSCGGLYQY FTNKEVVDEV EMFTAVYPKG NPTEHLVREL VLRAARKSGM
201: DYHELLNISH DKRRRYHDDV SVIMISFKGR MWRSPV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.