CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028615_P001	Maize	nucleus	91.09	90.21
Zm00001d047807_P001	Maize	cytosol	86.06	86.48
OQU92823	Sorghum	plastid	72.45	83.24
Os03t0275100-02	Rice	cytosol, peroxisome, plastid	73.26	71.63
TraesCS4B01G382400.1	Wheat	cytosol	25.28	66.1
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	58.18	59.34
TraesCS4B01G381900.1	Wheat	plastid	58.51	59.28
HORVU4Hr1G090650.1	Barley	cytosol, nucleus, peroxisome, plastid	58.18	58.56
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	56.73	57.57
EER90623	Sorghum	plastid	44.57	43.38
EES17579	Sorghum	mitochondrion, peroxisome, plastid	38.74	40.78
EES07427	Sorghum	plastid	36.3	37.4
EER90402	Sorghum	mitochondrion	20.26	32.13
EES12087	Sorghum	cytosol	25.93	30.71
EER94559	Sorghum	cytosol	19.12	30.03
EER95550	Sorghum	mitochondrion, peroxisome, plastid	18.15	28.07
KXG30997	Sorghum	mitochondrion	17.34	27.58
KXG37497	Sorghum	mitochondrion	16.05	26.26
OQU92535	Sorghum	nucleus	37.93	26.09
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	15.72	25.39
KXG26992	Sorghum	cytosol, mitochondrion	16.05	25.19
EER95306	Sorghum	mitochondrion	15.07	23.72

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	EntrezGene:8084937	UniProt:C5WPG8	EnsemblPlants:EER95099
ProteinID:EER95099	ProteinID:EER95099.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332	EnsemblPlantsGene:SORBI_3001G421000	SUPFAM:SSF81606
UniParc:UPI0001A8312E	RefSeq:XP_002468101.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:70203533..70206573

Molecular Weight (calculated)

67013.7 Da

IEP (calculated)

6.211

GRAVY (calculated)

-0.347

Length

617 amino acids

Sequence
(BLAST)

001: MGNGITKNPC FSGDPYAAAV ASDPLPDDSQ GHSFTYVPSG AAFEQPPTAA ATSSAESSFF SLSGAAISAN PATSASMPSF QVLNEMTWPQ STACTFESSR
101: SFAAVPLQAA PPRLSMSGPV QSTSGRFSET SGSASTISGP PSDSPFMSGP LDLAVGLQPS VSQLIAERRA ARSRLRDERS LLRFFVGTAS KLRLGSRRYR
201: RRPQEPAEPI KVSFSDGDYR SPPNGNVEWA QGMAGEDRFH VAVSEEHGWV FVGIYDGFNG PDATDYLFAN LYGVVHNELK GVLWDDIQAG DDARCGQQEA
301: AAGNAERLCL AEADGDSSEA KRRRTEVPVP GNNATPVHRD VLRALARALK KTEDAFFAAA EERAAESPEL GLVGSCVLVM VMKGTDVYVM NVGDSRAVLA
401: RRPEPDLKNV LGKASQDLQQ FKAEIMRELE AHDMDGLQAV QLTAEHSTAV HEEVMRIKGQ HLNDRNAIVN GRVKGKINVT RAFGVAYLKQ PKWNSRLLEA
501: FRINYVGTDP YVTCAPSLCH HRIVSSQDKF LVLSSDGLYQ YFTNKEVVDQ VEAFTAAEPD GDPAQHLVGE LVHRAARKAG METRQLLEIP RGARRHYHDD
601: VSIIVISFEG HIWRSSV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.