CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017670_P001	Maize	plastid	95.16	95.16
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	39.4	90.42
Zm00001d019519_P001	Maize	extracellular	19.53	90.0
TraesCS6B01G290600.1	Wheat	plastid	87.15	87.44
TraesCS6A01G263600.1	Wheat	plastid	87.15	87.44
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	86.98	87.27
HORVU6Hr1G066850.2	Barley	plastid	86.48	86.77
Os02t0690500-01	Rice	plastid	86.14	86.58
GSMUA_Achr5P13850_001	Banana	nucleus	57.26	56.41
CDY68192	Canola	mitochondrion, nucleus, plastid	47.08	49.91
CDY59038	Canola	plastid	46.58	48.69
KRH58222	Soybean	cytosol, nucleus, peroxisome	56.43	48.56
KRH04317	Soybean	cytosol, nucleus, plastid	56.09	47.93
KRH28277	Soybean	plastid	56.26	45.6
CDX84217	Canola	nucleus, plastid	50.25	45.4
CDY31682	Canola	nucleus, plastid	50.25	45.26
KRH77217	Soybean	plastid	56.59	45.02
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	57.93	44.09
Solyc08g007000.2.1	Tomato	nucleus	57.43	44.05
PGSC0003DMT400052881	Potato	nucleus	56.76	43.53
Solyc08g077150.2.1	Tomato	nucleus	56.43	42.46
PGSC0003DMT400045127	Potato	nucleus	56.26	42.23
Bra017322.1-P	Field mustard	nucleus	51.09	41.46
EER90623	Sorghum	plastid	43.57	41.17
Bra005350.1-P	Field mustard	mitochondrion, plastid	50.92	40.94
AT2G35350.1	Thale cress	nucleus	51.42	39.34
EES17579	Sorghum	mitochondrion, peroxisome, plastid	38.23	39.08
OQU92823	Sorghum	plastid	33.89	37.8
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	37.4	36.3
EES12087	Sorghum	cytosol	28.38	32.63
OQU92535	Sorghum	nucleus	45.91	30.66
EER90402	Sorghum	mitochondrion	19.37	29.82
EER95550	Sorghum	mitochondrion, peroxisome, plastid	18.7	28.07
KXG26992	Sorghum	cytosol, mitochondrion	18.36	27.99
KXG30997	Sorghum	mitochondrion	18.03	27.84
EER94559	Sorghum	cytosol	17.86	27.23
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	17.36	27.23
KXG37497	Sorghum	mitochondrion	16.36	25.99
EER95306	Sorghum	mitochondrion	15.86	24.23

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	EntrezGene:8073189	UniProt:C5Y0S4
EnsemblPlants:EES07427	ProteinID:EES07427	ProteinID:EES07427.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0005488	GO:GO:0005543	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009058	GO:GO:0009653	GO:GO:0009826	GO:GO:0009933	GO:GO:0009987	GO:GO:0010074
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0019538	GO:GO:0040007
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF241	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G275900	SUPFAM:SSF81606
UniParc:UPI0001A8622E	RefSeq:XP_002454451.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:61919250..61923236

Molecular Weight (calculated)

65113.6 Da

IEP (calculated)

5.841

GRAVY (calculated)

-0.294

Length

599 amino acids

Sequence
(BLAST)

001: MGSGASRLLT ACACSRPAPA PADDGPCLDD ALGHSFCYAA SSAAAAGHSS SFRHAISGAA LSANSSVPVP IYHSSGGAGG MPPPQYSSAF HTSSSFSSAP
101: LQLSNLSSGP LFLSGPIDRG AQLSGPLDQA VPFSGPLPAK PTKPAPSSSS RGFSRRFRKP SFGSLRRSVS EKNRPCVVPL RREDGVQWAH GRAGEDRVHV
201: VVSEDQRWLF VGIYDGFNGP EAPDFLVANL YRFLLRELRG IFYEEADPDS KRLWQFLADG DDEDSELDFS GSGRFALSLA RLKEQRHPLW AHAAAVGDGQ
301: SGREWGVKRL TAAPAVRDHM AVLSALARAL ATTESAYLDM TSQSMGSHPE LAVTGACLLV ALLRDDDVYV MNLGDSRAIV AQRRDDDDCL IGSMRVEDIG
401: VGLETESRIP GYSAIGLEAL QLSTDHSTSI EGEVQRIRRE HPDDDQCIVN DRVKGRLKVT RAFGAGYLKQ AKLNDGLLEM FRNEYIGDTP YISCTPSLCH
501: HKLSARDQFL VLSSDGLYQY LSNEEVVLHV ENFMERFPEG DPAQSLIEEL LSRAAKKAGM DFYELLDIPQ GDRRKYHDDV TIMVISLEGR IWKSSGTYV

Best Arabidopsis Sequence Match ( AT2G35350.1 )
(BLAST)

001: MGSGFSSLLP CFNQGHRNRR RHSSAANPSH SDLIDSFREP LDETLGHSYC YVPSSSNRFI SPFPSDRFVS PTASFRLSPP HEPGRIRGSG SSEQLHTGFR
101: AISGASVSAN TSNSKTVLQL EDIYDDATES SFGGGVRRSV VNANGFEGTS SFSALPLQPG PDRSGLFMSG PIERGATSGP LDPPAGEISR SNSAGVHFSA
201: PLGGVYSKKR RKKKKKSLSW HPIFGGEKKQ RPWVLPVSNF VVGAKKENIV RPDVEAMAAS SGENDLQWAL GKAGEDRVQL AVFEKQGWLF AGIYDGFNGP
301: DAPEFLMANL YRAVHSELQG LFWELEEEDD NPTDISTREL EQQGEFEDHV NEMASSSCPA TEKEEEEMGK RLTSSLEVVE VKERKRLWEL LAEAQAEDAL
401: DLSGSDRFAF SVDDAIGAGN AVSVGSKRWL LLSKLKQGLS KQGISGRKLF PWKSGVEENE TEEVDNVGVE EGVDKRRKRR KAGTVDHELV LKAMSNGLEA
501: TEQAFLEMTD KVLETNPELA LMGSCLLVAL MRDDDVYIMN IGDSRALVAQ YQVEETGESV ETAERVEERR NDLDRDDGNK EPLVVDSSDS TVNNEAPLPQ
601: TKLVALQLTT DHSTSIEDEV TRIKNEHPDD NHCIVNDRVK GRLKVTRAFG AGFLKQPKLN DALLEMFRNE YIGTDPYISC TPSLRHYRLT ENDQFMVLSS
701: DGLYQYLSNV EVVSLAMEKF PDGDPAQHVI QELLVRAAKK AGMDFHELLD IPQGDRRKYH DDCTVLVIAL GGSRIWKSSG KYL

Arabidopsis Description

PLL1PLL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.