CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	95.97	95.97
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	95.59	95.59
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	87.14	87.31
TraesCS2B01G307000.1	Wheat	nucleus	85.41	85.74
HORVU2Hr1G071850.2	Barley	nucleus	85.41	85.74
TraesCS2A01G290500.1	Wheat	nucleus	84.84	85.16
TraesCS2D01G288400.1	Wheat	nucleus	85.03	81.28
Bra022166.1-P	Field mustard	cytosol	28.02	62.66
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	56.62	61.84
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	57.97	57.63
PGSC0003DMT400011807	Potato	nucleus	52.4	55.04
CDY43107	Canola	cytosol, nucleus, peroxisome	51.63	54.9
KRH50856	Soybean	cytosol, nucleus, peroxisome	54.51	54.62
KRH37115	Soybean	cytosol, nucleus, peroxisome	42.8	54.52
AT3G16560.1	Thale cress	cytosol, nucleus, peroxisome	51.44	54.36
CDX92079	Canola	cytosol, nucleus, peroxisome	51.63	54.23
KRH02249	Soybean	cytosol, nucleus, peroxisome	54.51	54.2
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	52.21	52.21
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	31.29	51.42
Solyc12g099600.1.1	Tomato	plasma membrane	52.59	47.65
EES07427	Sorghum	plastid	32.63	28.38
KXG30997	Sorghum	mitochondrion	19.58	26.29
OQU92823	Sorghum	plastid	27.06	26.26
EER90402	Sorghum	mitochondrion	19.39	25.96
EER94559	Sorghum	cytosol	19.58	25.95
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	30.71	25.93
KXG37497	Sorghum	mitochondrion	18.62	25.73
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	18.81	25.65
EER95550	Sorghum	mitochondrion, peroxisome, plastid	19.58	25.56
EER90623	Sorghum	plastid	31.09	25.55
EES17579	Sorghum	mitochondrion, peroxisome, plastid	28.6	25.43
KXG26992	Sorghum	cytosol, mitochondrion	18.43	24.43
EER95306	Sorghum	mitochondrion	17.66	23.47
OQU92535	Sorghum	nucleus	33.01	19.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	EntrezGene:8075245	UniProt:C5YFG0
EnsemblPlants:EES12087	ProteinID:EES12087	ProteinID:EES12087.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF309	SMART:SM00332	EnsemblPlantsGene:SORBI_3006G064100
SUPFAM:SSF81606	unigene:Sbi.14209	UniParc:UPI0001A8733B	RefSeq:XP_002447759.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:42356353..42360654

Molecular Weight (calculated)

57386.8 Da

IEP (calculated)

4.610

GRAVY (calculated)

-0.187

Length

521 amino acids

Sequence
(BLAST)

001: MVDVELFYKD TSDHSISSEE EDMLIRSCSN LNVSFGYHCD SSQSFSPEND HGNGISPKNI FGTNTMIGSR NGSFTCLSGA AISANFTLAN TNICNGLIGE
101: EILPELDSPN SFRKIVSSPS MSRLDSYSTS QGSPVSTESS IFEISKNLWR SSAPTTVSSN FLTNTEVKMA GGAAGEDRVQ AVCSEKNGWL ICGIYDGFNG
201: RDAADFLAVT LYDNIVYYLY LLENRIKQQN GLYNSSETSL NGLKSELTLA MRNSENEDIK FSETFRAGVL NCLSTAVEQA ENDFLCMVEQ EMDDRPDLVS
301: VGSCVLVVLL HGTDLCILNL GDSRAVLASM PYVQNGALKA TQLTETHSLE NPLEYQRLLA DHPDDSSVVR GNKIKGKLKV TRAFGVGYLK QRKFNDALMG
401: ILRVRDLSSP PYVYTNPHTL SHKVTDDDLF VVLGSDGLFD FFSNDEVVWL VYQFMRDNPM GDPAKYLIEQ LILKAAKEAA LTAEELMRIP VGSRRKYHDD
501: VTVIVIILGN AQRTMTASTS L

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.