Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022166.1-P | Field mustard | cytosol | 44.83 | 94.85 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 90.06 | 90.61 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 90.47 | 89.92 |
| VIT_05s0020g01460.t01 | Wine grape | cytosol, peroxisome, plastid | 66.33 | 65.01 |
| GSMUA_Achr10P... | Banana | cytosol | 45.44 | 63.1 |
| KRH50856 | Soybean | cytosol, nucleus, peroxisome | 65.11 | 61.73 |
| KRH02249 | Soybean | cytosol, nucleus, peroxisome | 65.31 | 61.45 |
| PGSC0003DMT400011807 | Potato | nucleus | 60.85 | 60.48 |
| KRH37115 | Soybean | cytosol, nucleus, peroxisome | 50.1 | 60.39 |
| PGSC0003DMT400029441 | Potato | cytosol, nucleus, peroxisome | 59.63 | 56.43 |
| Solyc01g066870.2.1 | Tomato | cytosol, nucleus, peroxisome | 35.09 | 54.57 |
| Os04t0403701-01 | Rice | cytosol, nucleus, peroxisome | 55.58 | 52.69 |
| Solyc12g099600.1.1 | Tomato | plasma membrane | 61.05 | 52.35 |
| Zm00001d025323_P004 | Maize | cytosol, peroxisome, plastid | 54.56 | 51.63 |
| EES12087 | Sorghum | cytosol | 54.36 | 51.44 |
| HORVU2Hr1G071850.2 | Barley | nucleus | 53.75 | 51.06 |
| TraesCS2B01G307000.1 | Wheat | nucleus | 53.55 | 50.87 |
| Zm00001d000124_P003 | Maize | cytosol, peroxisome, plastid | 53.75 | 50.86 |
| TraesCS2A01G290500.1 | Wheat | nucleus | 53.35 | 50.67 |
| TraesCS2D01G288400.1 | Wheat | nucleus | 53.14 | 48.07 |
| AT3G55050.2 | Thale cress | mitochondrion | 21.5 | 27.6 |
| AT5G66080.1 | Thale cress | plastid | 21.1 | 27.01 |
| AT5G02760.1 | Thale cress | cytosol, mitochondrion | 20.08 | 26.76 |
| AT3G12620.2 | Thale cress | mitochondrion | 20.89 | 26.75 |
| AT3G51370.1 | Thale cress | cytosol, extracellular | 20.49 | 26.65 |
| AT2G28890.1 | Thale cress | nucleus | 35.09 | 26.45 |
| AT4G38520.1 | Thale cress | mitochondrion | 21.3 | 26.25 |
| AT1G07630.1 | Thale cress | cytosol, nucleus, peroxisome | 35.09 | 26.13 |
| AT5G06750.3 | Thale cress | cytosol, mitochondrion | 20.08 | 25.19 |
| AT5G02400.1 | Thale cress | nucleus | 34.28 | 25.07 |
| AT4G33920.1 | Thale cress | mitochondrion | 19.27 | 25.0 |
| AT3G09400.1 | Thale cress | cytosol, peroxisome, plastid | 32.86 | 24.92 |
| AT3G17090.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 19.07 | 24.48 |
| AT2G35350.1 | Thale cress | nucleus | 32.66 | 20.56 |
| AT2G46920.2 | Thale cress | nucleus | 35.09 | 20.21 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.3 | Gene3D:3.60.40.10 | EntrezGene:820905 | UniProt:A0A178VFN3 |
| ProteinID:AEE75836.1 | ProteinID:ANM63918.1 | ProteinID:ANM63920.1 | ArrayExpress:AT3G16560 | EnsemblPlantsGene:AT3G16560 | RefSeq:AT3G16560 |
| TAIR:AT3G16560 | RefSeq:AT3G16560-TAIR-G | EnsemblPlants:AT3G16560.1 | TAIR:AT3G16560.1 | EMBL:AY086406 | EMBL:AY136458 |
| ProteinID:BAB02747.1 | EMBL:BT008864 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_001325978.1 |
| RefSeq:NP_001325980.1 | RefSeq:NP_566554.1 | ProteinID:OAP04564.1 | PFAM:PF00481 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF538 | UniProt:Q9LUS8 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0000048725 |
| SEG:seg | : | : | : | : | : |
Description
Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
Coordinates
chr3:-:5635596..5638798
Molecular Weight (calculated)
53616.8 Da
IEP (calculated)
4.755
GRAVY (calculated)
-0.134
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.