Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10428 | Canola | mitochondrion | 85.68 | 87.33 |
| CDX70348 | Canola | cytosol, mitochondrion | 85.14 | 86.78 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 83.78 | 86.11 |
| Bra009569.1-P | Field mustard | mitochondrion | 84.32 | 85.95 |
| Bra028865.1-P | Field mustard | mitochondrion | 83.51 | 85.83 |
| CDY11224 | Canola | cytosol | 82.7 | 85.71 |
| Bra005755.1-P | Field mustard | cytosol | 82.16 | 85.15 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 83.24 | 83.47 |
| CDX80837 | Canola | cytosol, mitochondrion | 79.19 | 80.49 |
| GSMUA_Achr6P15470_001 | Banana | mitochondrion | 63.78 | 62.27 |
| GSMUA_Achr10P... | Banana | cytosol | 62.7 | 61.7 |
| GSMUA_Achr6P23480_001 | Banana | cytosol | 55.68 | 61.68 |
| AT3G12620.2 | Thale cress | mitochondrion | 62.97 | 60.52 |
| AT3G51370.1 | Thale cress | cytosol, extracellular | 59.46 | 58.05 |
| Os01t0976700-01 | Rice | mitochondrion | 57.57 | 56.65 |
| TraesCS3B01G604000.1 | Wheat | mitochondrion | 58.92 | 56.48 |
| HORVU3Hr1G114160.1 | Barley | mitochondrion | 47.3 | 56.27 |
| AT3G55050.2 | Thale cress | mitochondrion | 58.38 | 56.25 |
| TraesCS3D01G544100.1 | Wheat | mitochondrion | 58.65 | 56.22 |
| AT5G66080.1 | Thale cress | plastid | 58.38 | 56.1 |
| TraesCS3A01G538500.1 | Wheat | mitochondrion | 58.38 | 55.96 |
| HORVU3Hr1G117670.6 | Barley | mitochondrion | 59.46 | 55.7 |
| AT4G38520.1 | Thale cress | mitochondrion | 58.38 | 54.0 |
| TraesCS7A01G386400.1 | Wheat | cytosol | 18.92 | 50.0 |
| AT3G17090.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 50.0 | 48.18 |
| AT5G06750.3 | Thale cress | cytosol, mitochondrion | 48.38 | 45.55 |
| AT4G33920.1 | Thale cress | mitochondrion | 45.95 | 44.74 |
| HORVU2Hr1G009490.1 | Barley | mitochondrion | 17.84 | 41.77 |
| AT3G16560.1 | Thale cress | cytosol, nucleus, peroxisome | 26.76 | 20.08 |
| AT3G09400.1 | Thale cress | cytosol, peroxisome, plastid | 31.35 | 17.85 |
| AT1G07630.1 | Thale cress | cytosol, nucleus, peroxisome | 31.89 | 17.82 |
| AT2G28890.1 | Thale cress | nucleus | 30.81 | 17.43 |
| AT5G02400.1 | Thale cress | nucleus | 30.81 | 16.91 |
| AT2G35350.1 | Thale cress | nucleus | 31.08 | 14.69 |
| AT2G46920.2 | Thale cress | nucleus | 31.62 | 13.67 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | EntrezGene:831234 | ProteinID:AED90514.1 |
| ArrayExpress:AT5G02760 | EnsemblPlantsGene:AT5G02760 | RefSeq:AT5G02760 | TAIR:AT5G02760 | RefSeq:AT5G02760-TAIR-G | EnsemblPlants:AT5G02760.1 |
| TAIR:AT5G02760.1 | Unigene:At.69718 | EMBL:BT022008 | EMBL:BT023482 | ProteinID:CAB86030.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | GO:GO:1900056 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_195896.2 |
| PFAM:PF00481 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF367 | UniProt:Q501F9 |
| SMART:SM00331 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0000196B40 | SEG:seg | : |
Description
Probable protein phosphatase 2C 67 [Source:UniProtKB/Swiss-Prot;Acc:Q501F9]
Coordinates
chr5:+:625254..627124
Molecular Weight (calculated)
41336.6 Da
IEP (calculated)
9.147
GRAVY (calculated)
-0.325
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKPCWRIGA GMERSKINPT KVDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNPTVQG TFVGVYDGHG GPEASRFIAD NIFPKLKKFA
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.