Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 82.5 | 86.84 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 81.75 | 86.05 |
| Bra010741.1-P | Field mustard | plastid | 81.75 | 86.05 |
| Bra033566.1-P | Field mustard | cytosol, nucleus, plastid | 84.25 | 84.89 |
| CDY70696 | Canola | extracellular, peroxisome | 66.0 | 81.48 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 77.75 | 79.74 |
| KRG90665 | Soybean | mitochondrion | 75.25 | 75.82 |
| Solyc10g055650.1.1 | Tomato | cytosol | 64.25 | 75.81 |
| KRH36089 | Soybean | cytosol | 75.0 | 75.57 |
| PGSC0003DMT400046486 | Potato | mitochondrion | 73.0 | 75.26 |
| Solyc01g111730.2.1 | Tomato | cytosol, mitochondrion, plastid | 72.75 | 75.0 |
| PGSC0003DMT400068706 | Potato | mitochondrion | 70.75 | 73.89 |
| VIT_03s0038g02650.t01 | Wine grape | mitochondrion | 73.25 | 73.8 |
| GSMUA_Achr4P04870_001 | Banana | cytosol | 63.0 | 73.68 |
| GSMUA_Achr3P00610_001 | Banana | cytosol | 64.0 | 73.56 |
| PGSC0003DMT400009248 | Potato | mitochondrion | 71.25 | 73.08 |
| Solyc02g083420.2.1 | Tomato | mitochondrion | 70.75 | 72.56 |
| AT5G66080.1 | Thale cress | plastid | 69.5 | 72.21 |
| Os06t0717800-01 | Rice | mitochondrion | 70.25 | 71.68 |
| GSMUA_Achr3P26820_001 | Banana | mitochondrion | 70.0 | 71.07 |
| KRH69725 | Soybean | mitochondrion | 70.0 | 71.07 |
| Solyc03g033340.2.1 | Tomato | mitochondrion | 70.5 | 71.03 |
| PGSC0003DMT400058098 | Potato | mitochondrion | 70.5 | 71.03 |
| Zm00001d027570_P001 | Maize | cytosol, peroxisome, plastid | 63.25 | 70.87 |
| AT3G51370.1 | Thale cress | cytosol, extracellular | 67.0 | 70.71 |
| Os03t0137200-01 | Rice | mitochondrion | 70.25 | 70.43 |
| KRH07984 | Soybean | mitochondrion | 69.25 | 70.3 |
| EER90402 | Sorghum | mitochondrion | 68.25 | 70.18 |
| TraesCS7D01G524700.1 | Wheat | mitochondrion | 68.0 | 69.39 |
| HORVU7Hr1G117970.1 | Barley | mitochondrion | 68.0 | 69.39 |
| GSMUA_Achr1P26350_001 | Banana | mitochondrion, peroxisome, plastid | 68.75 | 69.27 |
| TraesCS7A01G537000.1 | Wheat | mitochondrion | 67.75 | 69.13 |
| TraesCS7B01G455500.1 | Wheat | mitochondrion | 67.75 | 69.13 |
| Zm00001d014797_P001 | Maize | mitochondrion | 67.5 | 68.53 |
| EER94559 | Sorghum | cytosol | 67.25 | 68.45 |
| Os10t0544900-01 | Rice | plastid | 67.25 | 68.45 |
| TraesCS1A01G205300.2 | Wheat | cytosol, peroxisome, plastid | 67.0 | 68.37 |
| TraesCS1B01G218900.1 | Wheat | cytosol, peroxisome, plastid | 67.0 | 68.37 |
| TraesCS1D01G208600.1 | Wheat | cytosol, peroxisome, plastid | 67.0 | 68.37 |
| GSMUA_Achr5P11520_001 | Banana | mitochondrion | 67.5 | 68.18 |
| Zm00001d047385_P004 | Maize | cytosol, mitochondrion, plastid | 67.75 | 68.09 |
| TraesCS4B01G335500.1 | Wheat | mitochondrion | 67.5 | 67.5 |
| TraesCS5A01G505300.1 | Wheat | mitochondrion | 67.25 | 67.42 |
| HORVU4Hr1G080570.1 | Barley | mitochondrion | 67.0 | 67.17 |
| HORVU1Hr1G052770.6 | Barley | nucleus, peroxisome, plastid | 67.0 | 67.17 |
| TraesCS4D01G331100.1 | Wheat | mitochondrion | 67.0 | 67.17 |
| Zm00001d027572_P004 | Maize | cytosol, peroxisome, plastid | 67.0 | 67.17 |
| Zm00001d027571_P003 | Maize | cytosol | 66.5 | 66.67 |
| GSMUA_Achr9P24110_001 | Banana | cytosol | 65.75 | 65.75 |
| EER95550 | Sorghum | mitochondrion, peroxisome, plastid | 65.5 | 65.66 |
| GSMUA_Achr7P03910_001 | Banana | cytosol, nucleus, peroxisome | 62.75 | 65.54 |
| GSMUA_Achr8P13120_001 | Banana | cytosol | 64.0 | 65.31 |
| Zm00001d048359_P004 | Maize | mitochondrion, peroxisome, plastid | 68.0 | 65.23 |
| VIT_00s0434g00020.t01 | Wine grape | cytosol | 66.0 | 64.71 |
| AT3G12620.2 | Thale cress | mitochondrion | 61.25 | 63.64 |
| AT3G55050.2 | Thale cress | mitochondrion | 60.5 | 63.02 |
| AT5G02760.1 | Thale cress | cytosol, mitochondrion | 54.0 | 58.38 |
| AT3G17090.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 54.5 | 56.77 |
| AT5G06750.3 | Thale cress | cytosol, mitochondrion | 50.0 | 50.89 |
| AT4G33920.1 | Thale cress | mitochondrion | 48.25 | 50.79 |
| Zm00001d036395_P008 | Maize | mitochondrion | 67.5 | 50.75 |
| AT3G16560.1 | Thale cress | cytosol, nucleus, peroxisome | 26.25 | 21.3 |
| AT1G07630.1 | Thale cress | cytosol, nucleus, peroxisome | 30.0 | 18.13 |
| AT2G28890.1 | Thale cress | nucleus | 29.25 | 17.89 |
| AT3G09400.1 | Thale cress | cytosol, peroxisome, plastid | 28.5 | 17.54 |
| AT5G02400.1 | Thale cress | nucleus | 28.5 | 16.91 |
| AT2G35350.1 | Thale cress | nucleus | 27.0 | 13.79 |
| AT2G46920.2 | Thale cress | nucleus | 29.5 | 13.79 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | EntrezGene:830009 | UniProt:A0A178UT21 |
| ProteinID:AEE86941.1 | ProteinID:AEE86942.1 | ArrayExpress:AT4G38520 | EnsemblPlantsGene:AT4G38520 | RefSeq:AT4G38520 | TAIR:AT4G38520 |
| RefSeq:AT4G38520-TAIR-G | EnsemblPlants:AT4G38520.1 | TAIR:AT4G38520.1 | EMBL:AY062454 | Unigene:At.47543 | EMBL:BT020368 |
| EMBL:BT021094 | ProteinID:CAB37508.1 | ProteinID:CAB80516.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 |
| InterPro:IPR036457 | RefSeq:NP_195564.2 | RefSeq:NP_974708.1 | ProteinID:OAO96743.1 | PFAM:PF00481 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PP2C |
| InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF342 | UniProt:Q5PNS9 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0000162BBD | SEG:seg |
Description
APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
Coordinates
chr4:-:18015620..18018500
Molecular Weight (calculated)
44125.5 Da
IEP (calculated)
7.916
GRAVY (calculated)
-0.253
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.