Factsheet for VIT_03s0038g02650.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36089	Soybean	cytosol	86.15	86.15
KRG90665	Soybean	mitochondrion	84.38	84.38
GSMUA_Achr4P04870_001	Banana	cytosol	69.02	80.12
GSMUA_Achr3P00610_001	Banana	cytosol	69.27	79.02
GSMUA_Achr3P26820_001	Banana	mitochondrion	77.83	78.43
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	76.57	76.57
Os06t0717800-01	Rice	mitochondrion	75.31	76.28
EER90402	Sorghum	mitochondrion	74.56	76.09
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	67.51	75.07
GSMUA_Achr5P11520_001	Banana	mitochondrion	74.31	74.49
Zm00001d014797_P001	Maize	mitochondrion	73.55	74.11
Os10t0544900-01	Rice	plastid	73.05	73.79
GSMUA_Achr8P13120_001	Banana	cytosol	72.8	73.72
CDY16313	Canola	extracellular	69.77	73.47
HORVU7Hr1G117970.1	Barley	mitochondrion	72.54	73.47
TraesCS7D01G524700.1	Wheat	mitochondrion	72.54	73.47
Os03t0137200-01	Rice	mitochondrion	73.8	73.43
EER94559	Sorghum	cytosol	72.54	73.28
AT4G38520.1	Thale cress	mitochondrion	73.8	73.25
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	73.3	73.12
AT3G51370.1	Thale cress	cytosol, extracellular	69.77	73.09
CDY33283	Canola	plastid	70.28	73.04
Bra038895.1-P	Field mustard	plastid	70.28	73.04
TraesCS7B01G455500.1	Wheat	mitochondrion	72.04	72.96
TraesCS7A01G537000.1	Wheat	mitochondrion	72.04	72.96
AT5G66080.1	Thale cress	plastid	70.28	72.47
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	72.54	72.18
CDX73725	Canola	vacuole	68.51	72.15
TraesCS5A01G505300.1	Wheat	mitochondrion	72.29	71.93
HORVU4Hr1G080570.1	Barley	mitochondrion	72.29	71.93
Zm00001d027571_P003	Maize	cytosol	72.04	71.68
TraesCS4D01G331100.1	Wheat	mitochondrion	72.04	71.68
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	71.03	71.03
TraesCS4B01G335500.1	Wheat	mitochondrion	71.54	71.0
CDY12086	Canola	cytosol, mitochondrion, nucleus	67.76	70.79
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	69.77	70.66
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	69.77	70.66
CDX90277	Canola	cytosol, mitochondrion, nucleus	67.51	70.53
EER95550	Sorghum	mitochondrion, peroxisome, plastid	70.78	70.43
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	69.52	70.41
VIT_00s0434g00020.t01	Wine grape	cytosol	72.29	70.34
Bra010741.1-P	Field mustard	plastid	67.25	70.26
GSMUA_Achr9P24110_001	Banana	cytosol	70.53	70.0
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	70.03	69.67
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	73.05	69.54
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	66.75	69.19
CDY54807	Canola	nucleus, peroxisome, plastid	67.0	68.21
CDY70696	Canola	extracellular, peroxisome	54.91	67.28
VIT_08s0040g02970.t01	Wine grape	cytosol	64.23	67.28
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	63.48	66.49
VIT_05s0077g00830.t01	Wine grape	extracellular	58.94	63.24
CDY29015	Canola	cytosol	53.15	58.61
Zm00001d036395_P008	Maize	mitochondrion	73.3	54.7
Bra036813.1-P	Field mustard	vacuole	68.51	54.51
CDX78002	Canola	vacuole	68.51	54.51
VIT_08s0007g06510.t01	Wine grape	mitochondrion	52.64	53.59
VIT_03s0091g00470.t01	Wine grape	mitochondrion	48.61	50.66
VIT_18s0001g09390.t01	Wine grape	mitochondrion	48.11	50.53
VIT_07s0129g00520.t01	Wine grape	cytosol	47.1	48.7
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	28.72	22.66
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	28.21	21.37
VIT_08s0007g00310.t01	Wine grape	nucleus	29.47	17.57
VIT_06s0004g04600.t01	Wine grape	nucleus	31.49	17.27
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	29.22	14.74
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	27.2	13.32

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100248713	wikigene:100248713	MapMan:18.4.24.2.4	Gene3D:3.60.40.10
ProteinID:CBI37846	ProteinID:CBI37846.3	UniProt:D7U527	EMBL:FN596508	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100248713	wikigene:LOC100248713	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF237	SMART:SM00332	SUPFAM:SSF81606	TIGR:TC61938	UniParc:UPI00015C849D	ArrayExpress:VIT_03s0038g02650
EnsemblPlantsGene:VIT_03s0038g02650	EnsemblPlants:VIT_03s0038g02650.t01	RefSeq:XP_002279993	RefSeq:XP_002279993.1	RefSeq:XP_003631567	RefSeq:XP_003631567.1

Description

No Description!

Coordinates

chr3:+:1871652..1877293

Molecular Weight (calculated)

43774.1 Da

IEP (calculated)

8.192

GRAVY (calculated)

-0.241

Length

397 amino acids

Sequence
(BLAST)

001: MLSGLMNFLR ACFRPGSDRY VHTGSDAGGR QDGLLWYKDS GQHSSGEFSM AVIQANNLLE DHSQIESGSL SSHESGPYGT FVGIYDGHGG PETARYINDH
101: LFHHLKRFTS EQQSMSTDVI RKAFQATEEG FISLVARQWS IRPQLAAVGS CCLVGVICGG NLHIANLGDS RAVLGRLVKA TGDVLAIQLS AEHNACIESV
201: RQELHSLHPD DNQIVVLKHN VWRVRGLIQI TRSIGDVYLK KAEFNREPLI AKFRLREPFR MPILSSDPAI SVHPLQPHDQ FVIFASDGLW EHLSNQEAVD
301: IVQSHPRNGS AKRLVKAALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFLDSNLV SRASSVKCSN ISVRGGGINL PANTLAPFAT PTEAGST

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.