Factsheet for VIT_01s0150g00510.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	62.6	68.76
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	58.59	61.03
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	57.82	58.16
EES12087	Sorghum	cytosol	57.63	57.97
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	57.06	57.39
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	56.87	57.31
HORVU2Hr1G071850.2	Barley	nucleus	56.11	56.65
TraesCS2B01G307000.1	Wheat	nucleus	55.92	56.45
TraesCS2A01G290500.1	Wheat	nucleus	55.92	56.45
TraesCS2D01G288400.1	Wheat	nucleus	55.92	53.76
VIT_05s0077g00830.t01	Wine grape	extracellular	20.23	28.65
VIT_03s0038g02650.t01	Wine grape	mitochondrion	21.37	28.21
VIT_03s0091g00470.t01	Wine grape	mitochondrion	20.23	27.82
VIT_08s0040g02970.t01	Wine grape	cytosol	19.85	27.44
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	19.66	27.18
VIT_18s0001g09390.t01	Wine grape	mitochondrion	19.27	26.72
VIT_07s0129g00520.t01	Wine grape	cytosol	18.89	25.78
VIT_00s0434g00020.t01	Wine grape	cytosol	19.66	25.25
VIT_08s0007g00310.t01	Wine grape	nucleus	31.68	24.92
VIT_06s0004g04600.t01	Wine grape	nucleus	33.4	24.17
VIT_08s0007g06510.t01	Wine grape	mitochondrion	17.56	23.59
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	33.4	22.24
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	33.21	21.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100264381	wikigene:100264381	MapMan:18.4.24.2.3	Gene3D:3.60.40.10
EMBL:AM425744	ProteinID:CAN82117	ProteinID:CAN82117.1	ProteinID:CCB52288	ProteinID:CCB52288.1	UniProt:F6HJ90
EMBL:FN595770	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	EntrezGene:LOC100264381	wikigene:LOC100264381	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF309	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00015CD401	ArrayExpress:VIT_01s0150g00510	EnsemblPlantsGene:VIT_01s0150g00510	EnsemblPlants:VIT_01s0150g00510.t01	RefSeq:XP_002268812	RefSeq:XP_002268812.2
RefSeq:XP_002268812.3	RefSeq:XP_003631367	RefSeq:XP_003631367.1	RefSeq:XP_010657634.1	RefSeq:XP_010657637.1	RefSeq:XP_019078280.1
RefSeq:XP_019078293.1	RefSeq:XP_019078297.1	RefSeq:XP_019078299.1	RefSeq:XP_019078303.1	RefSeq:XP_019078306.1	SEG:seg

Description

No Description!

Coordinates

chr1:-:22854551..22859676

Molecular Weight (calculated)

57633.0 Da

IEP (calculated)

4.855

GRAVY (calculated)

-0.249

Length

524 amino acids

Sequence
(BLAST)

001: MKRPEDIPVP SRDLSVSFGY QCSTTSPPSV NVPNGIDFSD GFMIQNSNMK TRSSSFSCLS GAALSANATL ANTNICNGFI GEEILPSLDS PRSFKRMASS
101: PSLSRVDSVF SSSQSSMTTL GGSASTENDF VESERNLWKS MSAPTRIESS SFLNAIDVQM AGGAAGEDRV QAVCSEENGW LFCGIYDGFN GRDAADFLAG
201: TLYENIGFYL HLLEWRAKKQ HDPFESTLED DTVRNEMFGH IAPNISDSGG VGTIVPHSSG GEFTCEQFHH SVTDCLIRAV AQAESDFMYM VEQEMEDRPD
301: LVSVGSCILV GLLHGNNFYV LNLGDSRAIL ATNETREDGK LKVIQLTETH SVDNEIEYRK LLDDHPEDPS PVINGRVKGK LKLTRAFGVG YLKKSKMNDM
401: LMGILRVRNL CSPPYVYTHP FTMSHTVSEK DQFIVLGSDG LFDFFSNDEV VQLVHLFIQH NPSGDPAKHL VEQLILKAAD NAGFSTEELM MIPAGRRRKY
501: HDDVTVIVIM LGNKQWTSTA STSL

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.