Factsheet for VIT_03s0091g00470.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0038g00350.t01
VIT_04s0008g02800.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	VIT_04s0008g02800.t01	AT2G24400.1	21798944
AT4G33920.1	VIT_03s0038g00350.t01	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11170_001	Banana	cytosol	77.17	78.19
VIT_07s0129g00520.t01	Wine grape	cytosol	75.85	75.26
VIT_18s0001g09390.t01	Wine grape	mitochondrion	72.44	73.02
AT4G33920.1	Thale cress	mitochondrion	72.7	72.89
GSMUA_Achr3P02220_001	Banana	mitochondrion	71.65	72.61
CDX72438	Canola	mitochondrion	70.34	71.66
Bra034592.1-P	Field mustard	mitochondrion	72.18	71.43
CDY28332	Canola	mitochondrion	71.92	71.35
CDY51944	Canola	mitochondrion	71.92	71.17
Bra036972.1-P	Field mustard	mitochondrion	69.82	71.12
GSMUA_Achr4P14220_001	Banana	mitochondrion	69.55	71.05
CDY49385	Canola	mitochondrion	69.29	70.59
GSMUA_Achr2P21550_001	Banana	mitochondrion	71.39	70.47
Os12t0580900-01	Rice	mitochondrion	70.34	68.37
HORVU5Hr1G018930.2	Barley	mitochondrion	68.24	67.89
TraesCS5D01G085200.1	Wheat	mitochondrion	66.93	66.58
TraesCS5B01G078500.1	Wheat	mitochondrion	66.67	66.32
TraesCS5A01G072500.1	Wheat	mitochondrion	66.4	66.06
Zm00001d048131_P001	Maize	cytosol	60.37	58.82
EER95306	Sorghum	mitochondrion	60.1	58.42
Os03t0207400-01	Rice	mitochondrion	60.1	58.42
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	58.27	57.07
VIT_08s0040g02970.t01	Wine grape	cytosol	53.02	53.3
VIT_08s0007g06510.t01	Wine grape	mitochondrion	54.07	52.82
TraesCS4A01G050000.1	Wheat	plastid	59.06	52.57
TraesCS4B01G254700.1	Wheat	plastid	58.53	52.35
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	51.97	52.24
VIT_05s0077g00830.t01	Wine grape	extracellular	50.13	51.62
HORVU4Hr1G069380.3	Barley	peroxisome	31.23	49.79
VIT_03s0038g02650.t01	Wine grape	mitochondrion	50.66	48.61
VIT_00s0434g00020.t01	Wine grape	cytosol	50.13	46.81
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	27.3	20.68
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	27.82	20.23
VIT_06s0004g04600.t01	Wine grape	nucleus	30.45	16.02
VIT_08s0007g00310.t01	Wine grape	nucleus	27.56	15.77
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	29.13	14.1
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	28.35	13.32

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100254953	wikigene:100254953	MapMan:18.4.24.2.4	Gene3D:3.60.40.10
EMBL:AM439590	ProteinID:CAN60716	ProteinID:CAN60716.1	ProteinID:CCB47716	ProteinID:CCB47716.1	UniProt:F6H674
EMBL:FN595242	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100254953
wikigene:LOC100254953	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF362	SMART:SM00332	SUPFAM:SSF81606
TIGR:TC65606	TIGR:TC67980	UniParc:UPI0001982E26	ArrayExpress:VIT_03s0091g00470	EnsemblPlantsGene:VIT_03s0091g00470	EnsemblPlants:VIT_03s0091g00470.t01
unigene:Vvi.930	RefSeq:XP_002262649	RefSeq:XP_002262649.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:-:6846055..6849796

Molecular Weight (calculated)

42457.9 Da

IEP (calculated)

9.127

GRAVY (calculated)

-0.309

Length

381 amino acids

Sequence
(BLAST)

001: MMLRSCLCRP LERCFGRRGG DGLMWNMDLK PHASGDFSIA VVQANSSLED QGQVFTSPSA TYVGVYDGHG GPEASRFVNK HLFPYLNKFA LEQGGLSADV
101: IKKAFNATEE EFLHVVKRSL PARPQIASVG SCCLVGAISN GVLYVANLGD SRAVLGRRAS EGRKNPVVAE RLSTDHNVSV EEVRREVEAL HPDDSHVVVY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEFNRD PIFQQFGNPV PLKRPVMTAE PSILIRKLLP QDSFLIFASD GLWEQLSDEA AVEIVFKNPR AGIAKRLVRA
301: ALHEAAKKRE MSYQDIKRIE KGIRRHFHDD ITVIVIYLDH HKGSTNRRPK HSTVNGTTNA PTDIFSLKAH EGDEDLLHTF S

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.