Factsheet for VIT_07s0129g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0038g00350.t01
VIT_04s0008g02800.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	VIT_04s0008g02800.t01	AT2G24400.1	21798944
AT4G33920.1	VIT_03s0038g00350.t01	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11170_001	Banana	cytosol	74.48	76.06
VIT_03s0091g00470.t01	Wine grape	mitochondrion	75.26	75.85
VIT_18s0001g09390.t01	Wine grape	mitochondrion	71.88	73.02
GSMUA_Achr3P02220_001	Banana	mitochondrion	71.09	72.61
Solyc02g092750.2.1	Tomato	cytosol	68.23	71.58
GSMUA_Achr4P14220_001	Banana	mitochondrion	69.27	71.31
PGSC0003DMT400064207	Potato	cytosol	68.75	70.97
GSMUA_Achr2P21550_001	Banana	mitochondrion	70.57	70.21
AT4G33920.1	Thale cress	mitochondrion	67.97	68.68
CDX72438	Canola	mitochondrion	65.89	67.65
Bra034592.1-P	Field mustard	mitochondrion	67.71	67.53
CDY28332	Canola	mitochondrion	67.45	67.45
Bra036972.1-P	Field mustard	mitochondrion	65.62	67.38
CDY51944	Canola	mitochondrion	67.45	67.27
CDY49385	Canola	mitochondrion	65.1	66.84
Os12t0580900-01	Rice	mitochondrion	67.45	66.07
HORVU5Hr1G018930.2	Barley	mitochondrion	64.06	64.23
TraesCS5B01G078500.1	Wheat	mitochondrion	63.8	63.97
TraesCS5D01G085200.1	Wheat	mitochondrion	63.54	63.71
TraesCS5A01G072500.1	Wheat	mitochondrion	63.54	63.71
EER95306	Sorghum	mitochondrion	59.11	57.91
Zm00001d048131_P001	Maize	cytosol	58.07	57.03
Os03t0207400-01	Rice	mitochondrion	57.29	56.12
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	56.51	55.78
VIT_05s0077g00830.t01	Wine grape	extracellular	50.78	52.7
VIT_08s0040g02970.t01	Wine grape	cytosol	50.52	51.19
TraesCS4B01G254700.1	Wheat	plastid	56.77	51.17
VIT_08s0007g06510.t01	Wine grape	mitochondrion	51.82	51.03
TraesCS4A01G050000.1	Wheat	plastid	56.51	50.7
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	49.74	50.4
HORVU4Hr1G069380.3	Barley	peroxisome	30.47	48.95
VIT_03s0038g02650.t01	Wine grape	mitochondrion	48.7	47.1
VIT_00s0434g00020.t01	Wine grape	cytosol	47.66	44.85
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	26.3	20.08
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	25.78	18.89
VIT_08s0007g00310.t01	Wine grape	nucleus	26.82	15.47
VIT_06s0004g04600.t01	Wine grape	nucleus	28.39	15.06
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	27.08	13.21
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	27.08	12.82

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100254308	wikigene:100254308	MapMan:18.4.24.2.4	Gene3D:3.60.40.10
EMBL:AM456371	ProteinID:CAN76780	ProteinID:CAN76780.1	ProteinID:CBI33728	ProteinID:CBI33728.3	UniProt:D7TTA6
EMBL:FN596246	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100254308
wikigene:LOC100254308	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF504	SMART:SM00332	SUPFAM:SSF81606
TIGR:TC59894	UniParc:UPI00015C9462	ArrayExpress:VIT_07s0129g00520	EnsemblPlantsGene:VIT_07s0129g00520	EnsemblPlants:VIT_07s0129g00520.t01	unigene:Vvi.16552
RefSeq:XP_002279324	RefSeq:XP_002279324.1	RefSeq:XP_010652743.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:15744936..15748796

Molecular Weight (calculated)

42837.3 Da

IEP (calculated)

7.461

GRAVY (calculated)

-0.216

Length

384 amino acids

Sequence
(BLAST)

001: MREILESCCR PLERCFKAGG GDELLWHLDL KPHASGDYSI AVVQANSSLE DQSQIFTSPS ATYIGVYDGH GGPEASRFIT NHIFPFLHKF SSEQGGLSAE
101: VIKKAFNATE EEFLHLVKQS WLARPQIASV GSCCLVGAIS NDVLYVANLG DSRAVLGRKV TGGRMNSSQM VVAERLSTDH NVGVEEVRKE VAALHPDDAH
201: IVVYTRGVWR IRGIIQVSRS IGDFYLKKPE LSRDPLFQQF GSPIPLKRPV MTAEPSIVIR NLKPHDLFLI FASDGLWEQL SDEAAVEIVL KNPRIGIAKR
301: LVRAALQQAA RKREMRYDDI RRIEKGVRRH FHDDITVIVM YLDHAQGSPN GRLKDHGIVD CTSAPADIFS LNSDETHNRF PIVH

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.