Factsheet for VIT_07s0005g02390.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96628	Soybean	cytosol, nucleus, peroxisome	78.67	71.93
KRH68360	Soybean	cytosol, nucleus, peroxisome	77.93	71.25
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	54.25	69.95
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	69.05	65.88
CDX80059	Canola	cytosol, nucleus, peroxisome	69.05	65.88
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	60.17	65.59
CDY41568	Canola	cytosol, nucleus, peroxisome	68.8	65.57
AT2G46920.2	Thale cress	nucleus	68.93	65.3
Zm00001d029297_P002	Maize	nucleus	65.84	55.51
OQU92535	Sorghum	nucleus	60.3	54.52
Os03t0372500-03	Rice	cytosol, mitochondrion, nucleus, plastid	65.6	54.45
Zm00001d047412_P004	Maize	mitochondrion	65.6	52.94
VIT_06s0004g04600.t01	Wine grape	nucleus	39.58	44.34
VIT_08s0007g00310.t01	Wine grape	nucleus	35.63	43.39
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	41.43	42.69
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	21.7	34.99
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	21.45	33.21
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	14.3	30.61
VIT_08s0040g02970.t01	Wine grape	cytosol	13.69	29.29
VIT_18s0001g09390.t01	Wine grape	mitochondrion	13.56	29.1
VIT_05s0077g00830.t01	Wine grape	extracellular	13.19	28.92
VIT_03s0091g00470.t01	Wine grape	mitochondrion	13.32	28.35
VIT_03s0038g02650.t01	Wine grape	mitochondrion	13.32	27.2
VIT_07s0129g00520.t01	Wine grape	cytosol	12.82	27.08
VIT_08s0007g06510.t01	Wine grape	mitochondrion	12.58	26.15
VIT_00s0434g00020.t01	Wine grape	cytosol	12.58	25.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	ProteinID:CCB60063	ProteinID:CCB60063.1	UniProt:F6HZE8
EMBL:FN596502	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015074	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF301	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002109460	ArrayExpress:VIT_07s0005g02390	EnsemblPlantsGene:VIT_07s0005g02390
EnsemblPlants:VIT_07s0005g02390.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:4745214..4752076

Molecular Weight (calculated)

90698.3 Da

IEP (calculated)

6.483

GRAVY (calculated)

-0.521

Length

811 amino acids

Sequence
(BLAST)

001: MGNSTSRVVG CFVPFNGKGG VDLDLLEPLD EGLGHSFCYV RPMILDSPAI TPSNSERFTV DSSTLDSETL SGSFRHENID DPSAVHRPNK CFPETTFKAI
101: SGASVSANVS TARTGNSNAL FTSDAQEPAA SFESTSSFAA IPLQPVPRGS GPLNGFMSGP LERGVMSGPL DATDKSNFSA PLAHGRRRPG LQRLMRSVSG
201: PMKSTLSRTF SRHSIGSSWM QRFFLHPVTQ FAWHPREPKF RPEAPRNCLD VGPSEGEYRK THNLQWAHGK AGEDRVHVVL SEEQGWLFIG IYDGFSGPDA
301: PDFLMSHLYK AIDKELEGLL WDYEEKSVND LLNLELPMNR DATNHATQEL SGITALTPGV LGVESIAAPT ANLTGQGRKS KRLYELLQME SWDGESSLSV
401: SEGGNQRRDS SSQYCEDPTT SGENGGIRME SNSVLAPLSV SEQRQGMRKS LISSKIRKMY RKQKSLRKKL FPWSYDWHRE ETCVDDRMAE TSGPVRRCKS
501: GVIDHDAVLR AMARALETTE EAYMEMVEKA LDKNPELALM GSCVLVMLMK DQDVYVMNLG DSRVILAQER PNDRHPNPNL AKDDVRHRNR SRESLVRMEL
601: DRISEESPMH NQNCQVNKAN KNREISFCRL KMRAVQLSTD HSTSIEEEVL RIKAEHVDDN QAILNDRVKG QLKVTRAFGA GFLKEPKCNE ALLEMFQIDY
701: VGTTPYVSCI PSVLHHRLSS SDRFLVLSSD GLYQYFSNEE VVAHVTWFME NVPEGDPAQY LIAELLFRAA KKNGMDFHEL LDIPHGDRRK YHDDVSVMVV
801: SLEGRIWRSS G

Best Arabidopsis Sequence Match ( AT2G46920.3 )
(BLAST)

001: MGNGTSRVVG CFVPSNDKNG VDLEFLEPLD EGLGHSFCYV RPSIFESPDI TPSNSERFTI DSSTIDSETL TGSFRNDIVD DPSFLNRHNS KGLAETTFKA
101: ISGASVSANV STARTGNQMA LCSSDVLEPA ASFESTSSFA SIPLQPLPRG GSGPLNGFMS GPLERGFASG PLDRNNGFMS GPIEKGVMSG PLDVSDRSNF
201: SAPLSFRRKK PRFQRFMRSV SGPMKSTLAR TFSRRSGGLS WMHRFFLHPE TRVSWAVGKD GKLHGEDPES CLESNRNLQW AHGKAGEDRV HVVLSEEQGW
301: LFIGIYDGFS GPDAPDFVMS HLYKAIDKEL EGLLWDYEEP SEDNQLQPDQ EPPTEENMCD PESISEQHSK SVVAESEEVM IDDISSLGNT DTQIADGPPG
401: DSAGPGKKSM RLYELLQLEQ WEGEEIGLKR YGGNVALNNM TNQVENPSTS GGGAGNDPCT TDRSALDGIP NSGQRHGTKK SQISSKIRRM YQKQKSLRKK
501: LFPWSYDWHR EEGICVEEKI VESSGPIRRR WSGTVDHDAV LRAMARALES TEEAYMDMVE KSLDINPELA LMGSCVLVML MKDQDVYVMN VGDSRAILAQ
601: ERLHDRHSNP GFGNDEGIGH KSRSRESLVR IELDRISEES PIHNQATPIS VSNKNRDVTS YRLKMRAVQL SSDHSTSVEE EIWRIRSEHP EDDQSILKDR
701: VKGQLKVTRA FGAGFLKKPN FNEALLEMFQ VEYIGTDPYI TCEPCTVHHR LTSSDRFMVL SSDGLYEYFS NEEVVAHVTW FIENVPEGDP AQYLIAELLS
801: RAATKNGMEF HDLLDIPQGD RRKYHDDVSV MVVSLEGRIW RSSGQYYPER KQKFNR

Arabidopsis Description

POLProtein phosphatase 2C 32 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.