Factsheet for VIT_08s0007g00310.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g04600.t01	Wine grape	nucleus	72.22	66.44
PGSC0003DMT400078173	Potato	nucleus	69.07	64.61
Solyc06g076100.2.1	Tomato	nucleus	68.62	64.55
KRH29800	Soybean	cytosol, nucleus, plastid	68.47	63.33
KRH24796	Soybean	nucleus	68.17	63.06
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	45.95	38.88
VIT_07s0005g02390.t01	Wine grape	mitochondrion, nucleus, peroxisome	43.39	35.63
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	25.23	33.4
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	24.92	31.68
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	17.72	31.13
VIT_08s0040g02970.t01	Wine grape	cytosol	17.42	30.61
VIT_03s0038g02650.t01	Wine grape	mitochondrion	17.57	29.47
VIT_05s0077g00830.t01	Wine grape	extracellular	16.37	29.46
VIT_08s0007g06510.t01	Wine grape	mitochondrion	16.22	27.69
VIT_03s0091g00470.t01	Wine grape	mitochondrion	15.77	27.56
VIT_18s0001g09390.t01	Wine grape	mitochondrion	15.62	27.51
VIT_07s0129g00520.t01	Wine grape	cytosol	15.47	26.82
VIT_00s0434g00020.t01	Wine grape	cytosol	16.22	26.47

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100244361	wikigene:100244361	MapMan:18.4.24.2.3	EMBL:AM467067
ProteinID:CAN65884	ProteinID:CAN65884.1	ProteinID:CCB55591	ProteinID:CCB55591.1	UniProt:F6HLC7	EMBL:FN595991
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
EntrezGene:LOC100244361	wikigene:LOC100244361	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00021098FD
ArrayExpress:VIT_08s0007g00310	EnsemblPlantsGene:VIT_08s0007g00310	EnsemblPlants:VIT_08s0007g00310.t01	RefSeq:XP_002270358	RefSeq:XP_002270358.2	SEG:seg

Description

No Description!

Coordinates

chr8:-:14615175..14618468

Molecular Weight (calculated)

74638.8 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.581

Length

666 amino acids

Sequence
(BLAST)

001: MGNGFGKVGI CFAGAGEVSR RHDIDMILSE SLDEGLGHSF CYIRPHPCRI SSSQVHTEYF QTTTFCSISG ASVSANTATP LSTALLDPYS YNCNLDRASA
101: FESSTSFASI PLQPVPRSGT PPRNTGGVPS SGPIERGFLS GPIERGLYSG PMENSGQLQR SFSNSEFGFK SKSKKRGLMR NFRKAIASKL SRGRTAAVAP
201: IKGKESDWVE KNNEKFKVTV SGPLLNSDDV DEDNESFDSQ NLQWAQGKAG EDRVQVLISE EHGWVFVGIY DGFNGPDATD FLLSNLYSAV HKELKGLLWN
301: DKFESAEPEN HPCGNRNMNL EVDSNSIKKQ GKNKKNRIRG TAKKWEENQR RWKCEWDRER SELDRRLKQQ SNPSDPDGAA AINHSEVLKA LSRALKKTEE
401: SYLDIADKMV MENPELCLMG SCVLVMLMKG EDVYLMNVGD SRAVLAHKSE PHLWLRKAHQ DLERINEETL HDLESFDGDQ SYGLPSLASL QLTMDHSTNV
501: KEEFERIKNE HPDDDSAVIN DRVKGSLKVT RAFGAGFLKQ PKWNNALLEM FKIEYVGTSP YLSCSPSLYH HRLGLKDRFL ILSSDGLYQY FTNQEAVSQV
601: EMFLASSPEG DPAQHLIEEV LFRAAKKASM DFHELLDIPQ GDRRRYHDDL SIIVISLEGR IWRSSV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.