Factsheet for Solyc06g076100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078173	Potato	nucleus	98.45	97.89
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.68	73.13
CDY71973	Canola	cytosol, nucleus, peroxisome	54.66	72.88
CDY71801	Canola	cytosol	55.93	72.66
AT1G07630.1	Thale cress	cytosol, nucleus, peroxisome	67.23	71.9
AT2G28890.1	Thale cress	nucleus	66.1	71.56
KRH24796	Soybean	nucleus	72.74	71.53
KRH29800	Soybean	cytosol, nucleus, plastid	72.6	71.39
Bra041012.1-P	Field mustard	nucleus	67.51	70.5
CDY57256	Canola	cytosol, nucleus, peroxisome	58.05	70.38
CDX95140	Canola	cytosol, mitochondrion, nucleus	61.16	69.84
CDY06718	Canola	mitochondrion, plastid	61.86	69.41
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	56.5	69.08
VIT_08s0007g00310.t01	Wine grape	nucleus	64.55	68.62
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	56.07	68.33
Solyc10g086490.1.1	Tomato	cytosol	50.0	59.4
Solyc09g010780.2.1	Tomato	cytosol	51.98	59.07
Solyc08g077150.2.1	Tomato	nucleus	46.19	41.08
Solyc08g007000.2.1	Tomato	nucleus	45.06	40.85
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	15.96	35.65
Solyc10g055650.1.1	Tomato	cytosol	16.67	34.81
Solyc01g107300.2.1	Tomato	cytosol	11.02	34.06
Solyc09g007080.2.1	Tomato	cytosol	17.51	32.8
Solyc02g083420.2.1	Tomato	mitochondrion	17.66	32.05
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	17.37	31.7
Solyc05g055980.2.1	Tomato	cytosol	13.98	31.53
Solyc03g033340.2.1	Tomato	mitochondrion	17.66	31.49
Solyc10g084410.1.1	Tomato	mitochondrion	16.53	31.12
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	15.82	29.47
Solyc12g099600.1.1	Tomato	plasma membrane	23.59	29.04
Solyc02g092750.2.1	Tomato	cytosol	14.97	28.96
Solyc06g065920.2.1	Tomato	nucleus	13.84	26.2
Solyc01g107310.2.1	Tomato	mitochondrion	6.64	25.41
Solyc10g078810.1.1	Tomato	cytosol	14.97	24.2
Solyc10g078820.1.1	Tomato	mitochondrion	15.54	23.91
Solyc10g078800.1.1	Tomato	mitochondrion	14.83	8.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4C9X1	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc06g076100.2	EnsemblPlants:Solyc06g076100.2.1	UniParc:UPI0002766F2A	SEG:seg

Description

No Description!

Coordinates

chr6:-:47244520..47247739

Molecular Weight (calculated)

79203.7 Da

IEP (calculated)

5.312

GRAVY (calculated)

-0.537

Length

708 amino acids

Sequence
(BLAST)

001: MGNGVGKLSV CFTSGGAVEG RRRKDFPLMI SDPLEDLGHS FCYVRPDQTR ISSSKVHSEE TTTFRSISGA SVSANTSTPL STAFVDLYSY NSIDRSSAFE
101: GSTSFASIPL QPIPRNSSIY SGPLFSSGLV PASGPTERGF MSGPIERGFQ SGPLDRGLYS GPLDRGCSDQ FQRSYSHGFA LRSRSRKGSF FRVLQRAISK
201: TLSRGQNSIV APIKGSISVK ESDWVVGAEK QNELTISSVN FSSECSLDDD DTLDNQNVQW AQGKAGEDRV HVVVSEEHGW VFVGIYDGFN GPDAPDFLVS
301: NLYPAVHKEL KGLLWDDKLD NNSSVTIPSP SLAVEESNQT IDDEFLRDSC SRCVEQENYP SAREDLSSDS RLKKKRGKGS KNRYRGVSKK WEENQRRWRC
401: EWDRERLELD RRLKEQLNGN GSNGSGSVNH ADVLKALSQA LKKTEEAYLD LADRMNMENP ELALMGSCVL VMLMKGEDVY VMNVGDSRAV LAQKKEPNLW
501: SQDLERINEE TLKDLELFDG DESDCVPNLT AFQLSIDHST SVEEEVQRIK SEHPDDPCAL MNDRVKGSLK VTRAFGAGFL KQPKWNNALL EMFRIDYIGT
601: SPYINCLPSL YHHRLGPRDR FLILSSDGLY QYFTNEEAVL EVEHFISWSP DGDPAQHLIE TVLFRAAKKA GMEFHELLEI PQGDRRRYHD DVSIIVISLE
701: GRIWRSSA

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.