Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 91.38 | 93.79 |
| Bra041012.1-P | Field mustard | nucleus | 96.88 | 77.88 |
| AT2G28890.1 | Thale cress | nucleus | 88.81 | 74.01 |
| CDY57256 | Canola | cytosol, nucleus, peroxisome | 74.86 | 69.86 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 78.53 | 69.03 |
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 73.39 | 68.85 |
| CDY06718 | Canola | mitochondrion, plastid | 78.17 | 67.51 |
| CDY40354 | Canola | cytosol | 25.32 | 57.26 |
| VIT_06s0004g04600.t01 | Wine grape | nucleus | 75.6 | 56.91 |
| KRH29800 | Soybean | cytosol, nucleus, plastid | 74.13 | 56.11 |
| KRH24796 | Soybean | nucleus | 73.94 | 55.97 |
| Solyc06g076100.2.1 | Tomato | nucleus | 72.66 | 55.93 |
| PGSC0003DMT400078173 | Potato | nucleus | 72.66 | 55.62 |
| CDY71703 | Canola | cytosol | 18.53 | 50.5 |
| CDY62569 | Canola | nucleus | 53.58 | 47.56 |
| CDY44706 | Canola | nucleus | 50.83 | 46.79 |
| CDY41610 | Canola | nucleus | 50.28 | 46.13 |
| CDX73980 | Canola | nucleus | 49.72 | 40.69 |
| CDY07928 | Canola | nucleus | 49.36 | 40.63 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 41.1 | 39.65 |
| CDX84217 | Canola | nucleus, plastid | 46.42 | 38.16 |
| CDY59038 | Canola | plastid | 40.0 | 38.05 |
| CDY31682 | Canola | nucleus, plastid | 45.87 | 37.59 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 50.83 | 32.59 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 50.64 | 32.43 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 28.44 | 31.63 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 28.44 | 31.25 |
| CDX73725 | Canola | vacuole | 20.0 | 28.91 |
| CDY16313 | Canola | extracellular | 19.82 | 28.65 |
| CDX76124 | Canola | mitochondrion | 19.45 | 28.34 |
| CDY33283 | Canola | plastid | 19.82 | 28.27 |
| CDY02904 | Canola | mitochondrion | 19.27 | 28.07 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 18.53 | 28.06 |
| CDY11224 | Canola | cytosol | 18.17 | 27.73 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 18.72 | 27.64 |
| CDX70348 | Canola | cytosol, mitochondrion | 18.35 | 27.55 |
| CDY10428 | Canola | mitochondrion | 18.35 | 27.55 |
| CDY51441 | Canola | mitochondrion | 19.45 | 27.39 |
| CDX73413 | Canola | mitochondrion | 19.45 | 27.39 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 19.08 | 27.37 |
| CDX80837 | Canola | cytosol, mitochondrion | 18.17 | 27.2 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 18.9 | 27.11 |
| CDY52665 | Canola | cytosol | 18.53 | 26.65 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 18.9 | 26.61 |
| CDY42159 | Canola | cytosol | 18.35 | 26.39 |
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 18.17 | 26.12 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 18.53 | 25.9 |
| CDX70071 | Canola | cytosol, mitochondrion | 18.17 | 25.85 |
| CDX98953 | Canola | cytosol, mitochondrion | 18.17 | 25.85 |
| CDX75902 | Canola | plastid | 17.8 | 25.73 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 17.8 | 25.66 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 17.8 | 25.66 |
| CDY40818 | Canola | mitochondrion | 5.87 | 25.4 |
| CDY14069 | Canola | cytosol, mitochondrion | 18.17 | 25.32 |
| CDY05001 | Canola | cytosol, mitochondrion | 18.17 | 25.32 |
| CDX72438 | Canola | mitochondrion | 16.7 | 24.33 |
| CDY51276 | Canola | mitochondrion | 3.67 | 24.1 |
| CDY28332 | Canola | mitochondrion | 16.88 | 23.96 |
| CDY51944 | Canola | mitochondrion | 16.88 | 23.9 |
| CDY49385 | Canola | mitochondrion | 16.33 | 23.8 |
| CDY70696 | Canola | extracellular, peroxisome | 13.95 | 23.46 |
| CDY29015 | Canola | cytosol | 14.5 | 21.94 |
| CDX78002 | Canola | vacuole | 20.0 | 21.84 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.3 | Gene3D:3.60.40.10 | GO:A0A078K226 | UniProt:A0A078K226 |
| EnsemblPlants:CDY71801 | ProteinID:CDY71801 | ProteinID:CDY71801.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00020353001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF228 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EDD460 | SEG:seg | : | : |
Description
BnaCnng74580DBnaCnng74580D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K226]
Coordinates
chrLK047574:-:61..2196
Molecular Weight (calculated)
59665.0 Da
IEP (calculated)
4.698
GRAVY (calculated)
-0.373
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNGITKLSK CFTGGGETRR KKEMKILEPD PLDEGLGHSF CYVRPDPIRV SSSKVHSEED TTTTTFRTIS GASVSANAAT PLSTSLYDPY GHIDRAAAFE
101: STTSFASIPL QPIPRSSGPI VPGSGPLERG FLSGPIERGF MSGPIDGLGL FSGPLGSESD QFQRSFSHGL ANRFGSRKGY LARVLRRAIS KTINRGQNSI
201: NLTVNSLNFS SEGSLDDDVS LESQNLQWAQ GKAGEDRVHV VVSEEHGWLF VGIYDGFNGP DAPDYLLSHL YPAVHRELKG LLWDDPKLDS NPSSDGIDHD
301: NSISTDPDPN SSDVLKALSE ALRKTEEAYL ENADMILHEN PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLETMIDFDG TCEGERAGLV PNLSAFQLTV
401: DHSTNVEEEV DRIRKEHPDD ASAVSNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YIGTSPYINC LPALYHHRLG SKDQFLILSS DGLYQYFTDE
501: EAVSEVELFI TLQPEGDPAQ HLVQELLFRA AKKAGNISKN LDDNL
101: STTSFASIPL QPIPRSSGPI VPGSGPLERG FLSGPIERGF MSGPIDGLGL FSGPLGSESD QFQRSFSHGL ANRFGSRKGY LARVLRRAIS KTINRGQNSI
201: NLTVNSLNFS SEGSLDDDVS LESQNLQWAQ GKAGEDRVHV VVSEEHGWLF VGIYDGFNGP DAPDYLLSHL YPAVHRELKG LLWDDPKLDS NPSSDGIDHD
301: NSISTDPDPN SSDVLKALSE ALRKTEEAYL ENADMILHEN PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLETMIDFDG TCEGERAGLV PNLSAFQLTV
401: DHSTNVEEEV DRIRKEHPDD ASAVSNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YIGTSPYINC LPALYHHRLG SKDQFLILSS DGLYQYFTDE
501: EAVSEVELFI TLQPEGDPAQ HLVQELLFRA AKKAGNISKN LDDNL
001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV
Arabidopsis Description
PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.