Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76124 | Canola | mitochondrion | 96.79 | 96.79 |
| CDX73413 | Canola | mitochondrion | 91.18 | 88.11 |
| CDY51441 | Canola | mitochondrion | 90.91 | 87.86 |
| AT3G55050.2 | Thale cress | mitochondrion | 86.63 | 84.38 |
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 73.26 | 72.3 |
| CDY52665 | Canola | cytosol | 72.46 | 71.5 |
| CDY42159 | Canola | cytosol | 71.66 | 70.71 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 72.46 | 70.03 |
| VIT_13s0067g03500.t01 | Wine grape | cytosol, mitochondrion, plastid | 68.98 | 68.07 |
| Solyc05g055980.2.1 | Tomato | cytosol | 55.08 | 65.61 |
| KRH36281 | Soybean | mitochondrion | 68.18 | 65.55 |
| KRG93033 | Soybean | mitochondrion | 67.91 | 65.46 |
| PGSC0003DMT400060005 | Potato | cytosol | 67.11 | 65.36 |
| GSMUA_Achr10P... | Banana | cytosol | 64.44 | 64.1 |
| GSMUA_Achr6P23480_001 | Banana | cytosol | 57.22 | 64.07 |
| HORVU3Hr1G114160.1 | Barley | mitochondrion | 51.87 | 62.38 |
| GSMUA_Achr6P15470_001 | Banana | mitochondrion | 63.1 | 62.27 |
| Os01t0976700-01 | Rice | mitochondrion | 61.76 | 61.44 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 59.09 | 61.39 |
| CDY11224 | Canola | cytosol | 58.56 | 61.34 |
| CDY10428 | Canola | mitochondrion | 59.36 | 61.16 |
| TraesCS3A01G538500.1 | Wheat | mitochondrion | 63.1 | 61.14 |
| TraesCS3B01G604000.1 | Wheat | mitochondrion | 63.1 | 61.14 |
| CDY16313 | Canola | extracellular | 61.5 | 61.01 |
| CDX70348 | Canola | cytosol, mitochondrion | 59.09 | 60.88 |
| TraesCS3D01G544100.1 | Wheat | mitochondrion | 62.83 | 60.88 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 61.5 | 60.53 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 61.23 | 60.26 |
| CDY33283 | Canola | plastid | 61.5 | 60.21 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 59.36 | 60.16 |
| HORVU3Hr1G117670.6 | Barley | mitochondrion | 63.37 | 60.0 |
| CDX73725 | Canola | vacuole | 59.89 | 59.42 |
| CDX80837 | Canola | cytosol, mitochondrion | 57.75 | 59.34 |
| CDX75902 | Canola | plastid | 56.95 | 56.5 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 58.56 | 56.15 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 56.68 | 56.08 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 56.68 | 56.08 |
| CDY70696 | Canola | extracellular, peroxisome | 47.33 | 54.63 |
| TraesCS7A01G386400.1 | Wheat | cytosol | 20.05 | 53.57 |
| CDY05001 | Canola | cytosol, mitochondrion | 51.6 | 49.36 |
| CDY14069 | Canola | cytosol, mitochondrion | 51.6 | 49.36 |
| CDY40818 | Canola | mitochondrion | 16.58 | 49.21 |
| CDX98953 | Canola | cytosol, mitochondrion | 50.0 | 48.83 |
| CDX72438 | Canola | mitochondrion | 48.66 | 48.66 |
| CDY49385 | Canola | mitochondrion | 48.4 | 48.4 |
| HORVU2Hr1G009490.1 | Barley | mitochondrion | 20.32 | 48.1 |
| CDY29015 | Canola | cytosol | 46.26 | 48.06 |
| CDX70071 | Canola | cytosol, mitochondrion | 49.2 | 48.04 |
| CDY28332 | Canola | mitochondrion | 47.86 | 46.61 |
| CDY51944 | Canola | mitochondrion | 47.86 | 46.49 |
| CDX78002 | Canola | vacuole | 60.16 | 45.09 |
| CDY51276 | Canola | mitochondrion | 8.02 | 36.14 |
| CDY40354 | Canola | cytosol | 21.39 | 33.2 |
| CDY71703 | Canola | cytosol | 13.9 | 26.0 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 27.81 | 21.22 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 27.81 | 20.97 |
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 28.61 | 20.15 |
| CDY57256 | Canola | cytosol, nucleus, peroxisome | 31.02 | 19.86 |
| CDY71801 | Canola | cytosol | 28.07 | 19.27 |
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 29.68 | 19.11 |
| CDY62569 | Canola | nucleus | 30.75 | 18.73 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 30.75 | 18.55 |
| CDY44706 | Canola | nucleus | 29.14 | 18.41 |
| CDY41610 | Canola | nucleus | 29.14 | 18.35 |
| CDY06718 | Canola | mitochondrion, plastid | 30.48 | 18.07 |
| CDY59038 | Canola | plastid | 26.74 | 17.45 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 26.2 | 17.35 |
| CDX73980 | Canola | nucleus | 30.48 | 17.12 |
| CDY07928 | Canola | nucleus | 30.21 | 17.07 |
| CDY31682 | Canola | nucleus, plastid | 28.61 | 16.09 |
| CDX84217 | Canola | nucleus, plastid | 28.07 | 15.84 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 33.96 | 14.94 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 33.96 | 14.92 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | GO:A0A078EQG6 | EnsemblPlants:CDY02904 |
| ProteinID:CDY02904 | ProteinID:CDY02904.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0043169 | EnsemblPlantsGene:GSBRNA2T00115142001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF358 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EDCF2D | SEG:seg |
Description
BnaC04g25820D
Coordinates
chrLK031938:-:250661..252457
Molecular Weight (calculated)
41626.9 Da
IEP (calculated)
7.910
GRAVY (calculated)
-0.193
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTTFRRIV TPCWRPFGIG EGSVPDDDGN GRLDGLLWYK DSGNHLTGEF SMAVVQANSL LEDHSQLESG PITTFVGVYD GHGGPEAARF VNERLFYNMR
101: RCASEQRGVS PDVITRAFVA TEDEFLGLVQ EQWRTRPQIA SVGACCLVGV VCNGLLYVAN AGDSRVVLGR LRSPFKEMKA VQLSSEHNAS VESVRDELRL
201: LHPSDPNIVV VKHKVWRVKG IIQVSRSIGD AYLKRAEFNQ EPLLPKFRVA ERFEKPIMRA EPTITVHKIH SEDQFLIFAS DGLWEHLSNQ EAVDIVNSCP
301: RNGVAKRLVK AALQVAAKKR EMRYSDLEKI EPGIRRHFHD DITVIVVFLH SANLGLRTPV SVRGGGELSG SAIF
101: RCASEQRGVS PDVITRAFVA TEDEFLGLVQ EQWRTRPQIA SVGACCLVGV VCNGLLYVAN AGDSRVVLGR LRSPFKEMKA VQLSSEHNAS VESVRDELRL
201: LHPSDPNIVV VKHKVWRVKG IIQVSRSIGD AYLKRAEFNQ EPLLPKFRVA ERFEKPIMRA EPTITVHKIH SEDQFLIFAS DGLWEHLSNQ EAVDIVNSCP
301: RNGVAKRLVK AALQVAAKKR EMRYSDLEKI EPGIRRHFHD DITVIVVFLH SANLGLRTPV SVRGGGELSG SAIF
001: MVSTTFRRIV SPCWRPFGIG EDSSPGSDDT NGRLDGLLWY KDSGNHITGE FSMAVVQANN LLEDHSQLES GPISLHESGP EATFVGVYDG HGGPEAARFV
101: NDRLFYNIKR YTSEQRGMSP DVITRGFVAT EEEFLGLVQE QWKTKPQIAS VGACCLVGIV CNGLLYVANA GDSRVVLGKV ANPFKELKAV QLSTEHNASI
201: ESVREELRLL HPDDPNIVVL KHKVWRVKGI IQVSRSIGDA YLKRAEFNQE PLLPKFRVPE RFEKPIMRAE PTITVHKIHP EDQFLIFASD GLWEHLSNQE
301: AVDIVNSCPR NGVARKLVKA ALQEAAKKRE MRYSDLEKIE RGIRRHFHDD ITVIVVFLHA TNFATRTPIS VKGGGLLSAH NPVL
101: NDRLFYNIKR YTSEQRGMSP DVITRGFVAT EEEFLGLVQE QWKTKPQIAS VGACCLVGIV CNGLLYVANA GDSRVVLGKV ANPFKELKAV QLSTEHNASI
201: ESVREELRLL HPDDPNIVVL KHKVWRVKGI IQVSRSIGDA YLKRAEFNQE PLLPKFRVPE RFEKPIMRAE PTITVHKIHP EDQFLIFASD GLWEHLSNQE
301: AVDIVNSCPR NGVARKLVKA ALQEAAKKRE MRYSDLEKIE RGIRRHFHDD ITVIVVFLHA TNFATRTPIS VKGGGLLSAH NPVL
Arabidopsis Description
PP2C6Probable protein phosphatase 2C 48 [Source:UniProtKB/Swiss-Prot;Acc:Q94CL8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.