Factsheet for PGSC0003DMT400060005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g055980.2.1	Tomato	cytosol	80.21	98.09
AT3G12620.2	Thale cress	mitochondrion	75.26	75.06
VIT_13s0067g03500.t01	Wine grape	cytosol, mitochondrion, plastid	73.96	74.93
CDY52665	Canola	cytosol	73.96	74.93
CDY08420	Canola	cytosol, mitochondrion, plastid	73.44	74.41
CDY42159	Canola	cytosol	73.44	74.41
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	74.74	74.16
CDY50535	Canola	cytosol, mitochondrion, plastid	74.74	74.16
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	74.48	73.71
KRG93033	Soybean	mitochondrion	71.09	70.36
KRH36281	Soybean	mitochondrion	71.09	70.18
GSMUA_Achr10P...	Banana	cytosol	68.49	69.95
AT3G55050.2	Thale cress	mitochondrion	69.79	69.79
PGSC0003DMT400005115	Potato	cytosol	68.23	69.31
PGSC0003DMT400028715	Potato	cytosol	66.93	68.35
GSMUA_Achr6P23480_001	Banana	cytosol	59.38	68.26
CDX76124	Canola	mitochondrion	66.15	67.91
GSMUA_Achr6P15470_001	Banana	mitochondrion	66.93	67.81
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	67.19	67.54
CDY02904	Canola	mitochondrion	65.36	67.11
Bra007131.1-P	Field mustard	mitochondrion	67.45	66.93
CDY51441	Canola	mitochondrion	67.45	66.93
CDX73413	Canola	mitochondrion	67.45	66.93
TraesCS3A01G538500.1	Wheat	mitochondrion	65.36	65.03
HORVU3Hr1G114160.1	Barley	mitochondrion	52.6	64.95
Os01t0976700-01	Rice	mitochondrion	63.54	64.89
TraesCS3B01G604000.1	Wheat	mitochondrion	65.1	64.77
TraesCS3D01G544100.1	Wheat	mitochondrion	64.84	64.51
PGSC0003DMT400046486	Potato	mitochondrion	64.84	64.18
HORVU3Hr1G117670.6	Barley	mitochondrion	65.36	63.54
PGSC0003DMT400068706	Potato	mitochondrion	62.76	62.92
PGSC0003DMT400009248	Potato	mitochondrion	63.8	62.82
PGSC0003DMT400058098	Potato	mitochondrion	62.76	60.71
TraesCS7A01G386400.1	Wheat	cytosol	21.35	58.57
PGSC0003DMT400067223	Potato	mitochondrion	51.3	52.67
PGSC0003DMT400066175	Potato	cytosol	50.0	51.2
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	48.96	50.67
HORVU2Hr1G009490.1	Barley	mitochondrion	20.57	50.0
PGSC0003DMT400064207	Potato	cytosol	46.61	48.12
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	41.41	41.19
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	40.36	39.74
PGSC0003DMT400029765	Potato	mitochondrion	38.8	36.43
PGSC0003DMT400029770	Potato	mitochondrion	35.94	32.39
PGSC0003DMT400029776	Potato	cytosol	13.54	28.26
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	28.65	21.11
PGSC0003DMT400011807	Potato	nucleus	26.82	20.77
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	30.73	19.67
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	30.21	18.38
PGSC0003DMT400078173	Potato	nucleus	32.81	17.7
PGSC0003DMT400052881	Potato	nucleus	31.51	15.49
PGSC0003DMT400045127	Potato	nucleus	31.25	15.04
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	9.11	10.29

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102589530	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M1C525	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400023347	PGSC:PGSC0003DMG400023347	EnsemblPlants:PGSC0003DMT400060005	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF358	SMART:SM00332	SUPFAM:SSF81606	TMHMM:TMhelix	UniParc:UPI000294AAD1	RefSeq:XP_006345807.1

Description

Protein phosphatase 2C 38 [Source:PGSC_GENE;Acc:PGSC0003DMG400023347]

Coordinates

chr5:-:51500063..51507397

Molecular Weight (calculated)

42731.1 Da

IEP (calculated)

7.662

GRAVY (calculated)

-0.257

Length

384 amino acids

Sequence
(BLAST)

001: MVTSTWKRYV YPCWKPTLDN EGDNSSSRGG DPGGSVDGLW WYKDLGHHVN GEFSMAVIQA NNILEDQSQL ESGSMSLIEA GPQGTFVGIY DGHAGAEAAR
101: FINGRLFENV KKFTSEDQVM SADVISKAYL ATEEEFLSLV RNQWQTRPQI ASVGSCCLVG IICSGMLYIA NAGDSRAVLG KRERALKEVK AVQLSSEHNA
201: SLESVREELR SLHPDDPNVV VLKHKVWRVK GIIQVSRSIG DAYLKRAEFN REPLLPKFRF PGTFQKPILL AEPSIFVQKL LPEDQFLIFA SDGLWEHLSN
301: QEAVDIVSSC EHHGIARKLI KAALQEAAKK REMRYADLKR IDRGVRRHFH DDITVIVLFL DSHLISRSSF RAPVVSIKGG GGGP

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.