Factsheet for PGSC0003DMT400049278

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

nucleus 2
peroxisome 1
plasma membrane 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g086490.1.1	Tomato	cytosol	94.0	94.63
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	73.83	70.21
CDY40354	Canola	cytosol	27.5	68.46
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	35.0	61.76
GSMUA_Achr2P16350_001	Banana	mitochondrion	53.0	57.09
GSMUA_Achr5P29080_001	Banana	mitochondrion	54.0	56.15
CDY71703	Canola	cytosol	18.5	55.5
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	54.0	53.2
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	49.5	51.74
PGSC0003DMT400078173	Potato	nucleus	60.17	50.7
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	49.0	50.43
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	52.33	50.08
CDY62569	Canola	nucleus	51.17	50.0
Zm00001d012962_P001	Maize	mitochondrion	52.33	49.68
EER90623	Sorghum	plastid	52.33	49.53
TraesCS5A01G479600.1	Wheat	plastid	52.67	49.45
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	52.5	49.37
Zm00001d034655_P001	Maize	peroxisome	50.5	49.27
CDY44706	Canola	nucleus	48.5	49.16
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	52.33	49.14
HORVU5Hr1G113240.1	Barley	plastid	52.33	49.06
CDY41610	Canola	nucleus	48.0	48.48
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	51.33	47.38
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	45.67	45.9
AT5G02400.1	Thale cress	nucleus	51.5	45.85
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	45.17	45.02
CDY07928	Canola	nucleus	49.67	45.02
Bra029766.1-P	Field mustard	nucleus	48.17	44.88
CDX73980	Canola	nucleus	49.33	44.44
Bra001308.1-P	Field mustard	nucleus	49.67	43.57
Bra009593.1-P	Field mustard	nucleus	51.83	38.68
PGSC0003DMT400045127	Potato	nucleus	46.17	34.71
PGSC0003DMT400052881	Potato	nucleus	45.0	34.57
PGSC0003DMT400011807	Potato	nucleus	26.5	32.06
PGSC0003DMT400005115	Potato	cytosol	20.17	32.01
PGSC0003DMT400060005	Potato	cytosol	19.67	30.73
PGSC0003DMT400028715	Potato	cytosol	19.17	30.59
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	26.5	30.52
PGSC0003DMT400068706	Potato	mitochondrion	19.33	30.29
PGSC0003DMT400009248	Potato	mitochondrion	19.5	30.0
PGSC0003DMT400046486	Potato	mitochondrion	19.0	29.38
PGSC0003DMT400058098	Potato	mitochondrion	19.33	29.22
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	17.5	27.2
PGSC0003DMT400066175	Potato	cytosol	17.0	27.2
PGSC0003DMT400067223	Potato	mitochondrion	16.83	27.01
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	16.5	26.68
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	16.83	25.9
PGSC0003DMT400064207	Potato	cytosol	15.83	25.54
PGSC0003DMT400029765	Potato	mitochondrion	17.17	25.18
PGSC0003DMT400029770	Potato	mitochondrion	14.5	20.42
PGSC0003DMT400029776	Potato	cytosol	5.5	17.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102587498	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
UniProt:M1BNI5	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400019154	PGSC:PGSC0003DMG400019154	EnsemblPlants:PGSC0003DMT400049278	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002962D8E	RefSeq:XP_006349544.1	SEG:seg	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400019154]

Coordinates

chr10:+:51232357..51234476

Molecular Weight (calculated)

66928.6 Da

IEP (calculated)

5.763

GRAVY (calculated)

-0.419

Length

600 amino acids

Sequence
(BLAST)

001: MGNGIGKLKF CFAGDVGEIS KRRHDIGIDL IDSLDKGLGH SFCYILHDSS SKNQHFLEDS SSSATTTISS NSSSTSQTTA FRTISGASIS ANTSTTPLST
101: ALVDVSNTYI EKSSAFESSQ WFSSFPLQPI PRRSIHSICS GPIPRVSNSG SGPIERGFLS GPMERSFTSG PLENQYDQQP QRYKPESSKW DIVRNLKKVL
201: SMNLVEKKKN NGSLNSLYED DENNGSFRSR NVQWAQGKAG EDRVHVVISE EYGWVFVGIY DGFNGPDATD FLLKNLYSNV FKELKGLLWN DKLESSENLM
301: CNETVIVQNQ EFDQSKIAGI DHLDVLNALS EALRRAEESY LEITDSMVNE NPELALMGSC VLVMLMKGND VYLMNVGDSR AVLAQNPEPD RSIGNLGLIN
401: EGSRNSIDTL YRVVSDRKHN LSSCQLTMDH STSVKEEVLR IRSEHPSDTS AIKNNRVKGS LNVTRAFGAG FLKQPKWNNG LLGVFRIDYV GNSPYINCIP
501: SLYHHRLGPR DRFLILSSDG LYQYFTNEEA VSEVETFMSI FPEGDPAQHL VEEVLFRAAK KAGMDFHELL DIPQGDRRKY HDDVSIIIIS FEGRIWRSSV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [cytosol,nucleus,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.