Factsheet for Zm00001d012962_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90623	Sorghum	plastid	93.83	93.53
Zm00001d034655_P001	Maize	peroxisome	87.03	89.43
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	86.87	85.92
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	81.8	82.46
HORVU5Hr1G113240.1	Barley	plastid	83.23	82.19
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	82.75	81.97
TraesCS5A01G479600.1	Wheat	plastid	82.75	81.85
CDY40354	Canola	cytosol	26.74	70.12
GSMUA_Achr5P29080_001	Banana	mitochondrion	59.02	64.64
GSMUA_Achr2P16350_001	Banana	mitochondrion	56.96	64.63
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	58.7	60.92
CDY71703	Canola	cytosol	17.25	54.5
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	49.68	52.33
Solyc10g086490.1.1	Tomato	cytosol	48.89	51.85
CDY62569	Canola	nucleus	48.73	50.16
Solyc09g010780.2.1	Tomato	cytosol	48.1	48.8
CDY44706	Canola	nucleus	45.41	48.48
CDY41610	Canola	nucleus	45.41	48.32
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	47.47	47.54
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	48.89	47.54
AT5G02400.1	Thale cress	nucleus	49.68	46.59
Bra029766.1-P	Field mustard	nucleus	45.57	44.72
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	41.93	44.39
CDY07928	Canola	nucleus	45.89	43.81
Zm00001d047807_P001	Maize	cytosol	42.41	43.65
CDX73980	Canola	nucleus	45.73	43.39
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	41.3	43.36
Zm00001d028615_P001	Maize	nucleus	42.72	43.34
Zm00001d019519_P001	Maize	extracellular	8.86	43.08
Zm00001d011062_P001	Maize	cytosol, peroxisome, plastid	35.28	42.97
Zm00001d017670_P001	Maize	plastid	40.19	42.4
Bra001308.1-P	Field mustard	nucleus	45.89	42.4
Bra009593.1-P	Field mustard	nucleus	50.79	39.93
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	19.3	35.88
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	13.92	33.72
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	17.88	31.65
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	25.32	30.71
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	25.32	30.71
Zm00001d029297_P002	Maize	nucleus	45.89	30.15
Zm00001d014797_P001	Maize	mitochondrion	18.35	29.44
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	18.51	29.32
Zm00001d027571_P003	Maize	cytosol	18.35	29.07
Zm00001d047412_P004	Maize	mitochondrion	45.89	28.86
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	17.88	28.39
Zm00001d017643_P001	Maize	mitochondrion	17.09	27.91
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	18.2	27.58
Zm00001d002542_P001	Maize	cytosol, mitochondrion	16.93	27.3
Zm00001d013220_P001	Maize	mitochondrion	15.82	27.25
Zm00001d034109_P001	Maize	mitochondrion	16.14	27.13
Zm00001d034738_P001	Maize	mitochondrion	16.14	26.91
Zm00001d044834_P001	Maize	golgi	14.87	25.54
Zm00001d048131_P001	Maize	cytosol	14.56	23.53
Zm00001d036395_P008	Maize	mitochondrion	18.2	21.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:103625761	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	UniProt:A0A1D6GE50
ProteinID:AQK61894.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00022172EA	EnsemblPlantsGene:Zm00001d012962
EnsemblPlants:Zm00001d012962_P001	EnsemblPlants:Zm00001d012962_T001	SEG:seg	:	:	:

Description

Probable protein phosphatase 2C 4

Coordinates

chr5:+:2395497..2399273

Molecular Weight (calculated)

68206.2 Da

IEP (calculated)

5.398

GRAVY (calculated)

-0.279

Length

632 amino acids

Sequence
(BLAST)

001: MGNSLACFCC GGGAAGRRRH VAPAALPSDP AYDEGLGHSF CYVRPDKVLV PFSADDDDLV ADAKAAAAAE EPTTFRAISG AALSANVSTQ LSTSVLLLLP
101: DESSSAAAAS SSSSGFESSE SFAAVPLQPV PRFPSGPICA HGGGFLSGPI ERGFLSGPLD AALMSGPLPC AATSARMGGG AVPALRRSLS HGGRRLRNFT
201: RALLARADKF QDSMDLGSAA AAACGAGSAG LQWAQGKAGE DRVHIVVSEE RGWVFVGIYD GFNGPDATDF LVSHLYAAVH RELRGLLWDQ CEQEEQRDTD
301: PDQPMSTTAS YHQDQPANGR RARRSRPPRG ADDDQRRWKC EWERDCSSLK PPTQRPPRSS SENDHLAVLK ALARALRKTE EAYLDVADKM VGEFPELALM
401: GSCVLAMLMK GEDMYLMNVG DSRAVLGTMD SVDLEEISGG SFDGLVGDGT PLLSALQLTS EHSTSVREEV CRIRNEHPGD PSAISKDRVK GSLKVTRAFG
501: AGFLKQPKWN DALLEVFRID YVGSSPYITC NPSLYHHRLS TRDRFLILSS DGLYQYFTNE EAVAQVEMFI ATTPEGDPAQ HLVEEVLFRA ANKAGMDFHE
601: LIEIPHGDRR RYHDDVSVIV ISLEGRIWRS CV

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.