Factsheet for Zm00001d028615_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	90.21	91.09
Zm00001d047807_P001	Maize	cytosol	87.0	88.27
Os03t0275100-02	Rice	cytosol, peroxisome, plastid	73.19	72.27
TraesCS4B01G382400.1	Wheat	cytosol	25.36	66.95
TraesCS4B01G381900.1	Wheat	plastid	59.23	60.59
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	58.59	60.33
HORVU4Hr1G090650.1	Barley	cytosol, nucleus, peroxisome, plastid	58.59	59.54
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	57.62	59.05
Zm00001d034655_P001	Maize	peroxisome	43.18	43.74
Zm00001d012962_P001	Maize	mitochondrion	43.34	42.72
Zm00001d011062_P001	Maize	cytosol, peroxisome, plastid	35.31	42.39
Zm00001d019519_P001	Maize	extracellular	8.35	40.0
Zm00001d017670_P001	Maize	plastid	36.28	37.73
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	26.65	31.86
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	26.48	31.67
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	17.82	31.09
Zm00001d014797_P001	Maize	mitochondrion	18.78	29.7
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	12.36	29.5
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	18.78	29.4
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	18.3	28.57
Zm00001d027571_P003	Maize	cytosol	18.14	28.32
Zm00001d017643_P001	Maize	mitochondrion	17.01	27.39
Zm00001d013220_P001	Maize	mitochondrion	16.05	27.25
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	17.98	26.86
Zm00001d034109_P001	Maize	mitochondrion	16.05	26.6
Zm00001d029297_P002	Maize	nucleus	40.45	26.2
Zm00001d002542_P001	Maize	cytosol, mitochondrion	16.05	25.51
Zm00001d034738_P001	Maize	mitochondrion	15.41	25.33
Zm00001d047412_P004	Maize	mitochondrion	40.45	25.07
Zm00001d044834_P001	Maize	golgi	14.45	24.46
Zm00001d048131_P001	Maize	cytosol	15.09	24.04
Zm00001d036395_P008	Maize	mitochondrion	18.94	22.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:103634426	MapMan:18.4.24.2.3	UniProt:A0A1D6JY29	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	ProteinID:ONL96571.1
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF382	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002219D51	EnsemblPlantsGene:Zm00001d028615	EnsemblPlants:Zm00001d028615_P001
EnsemblPlants:Zm00001d028615_T001	SEG:seg	:	:	:	:

Description

Probable protein phosphatase 2C 4

Coordinates

chr1:+:40886065..40889048

Molecular Weight (calculated)

67782.5 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.350

Length

623 amino acids

Sequence
(BLAST)

001: MGNGITKNPC FSGDSYAAAV ASDPLPDDSH GHSFTYVPSG AAFDQPQTSA ATSSESSFFS LSGAAISANP ATSASMPSFR LFNELTWPPS TACTFESSRS
101: FSAIPLQAAP PRLSMSGPVQ FTSGRFSETS GSTSTISGTP SDRPFMSGPL DHSLSISSSS AGLLHPSVSQ LIAERRAARS RLRDERSLLR FFVRTASKLW
201: LGSPRYGRRP QEPADPIKFS FSDGDYRSPP NSNVEWAQGM AGEDRFHVAV SEEHGWVFVG IYDGFNGPDA TDYLFANLYV AVHNELKGLL WDGIQAGDSA
301: RCGEQEAGAG NAERLCIAQA DGDGAEAKRR RTEVPMPGNS ATPVHRDVLR ALARALKKTE EAFFAAAEER AAESPELGLM GSCVLVMVMK GTDVYVMNVG
401: DSRAVLARRP EPDLKNVLGK ASQDLQQFKV EIMRELEAHD MDGLQAVQLT PEHSTAVQEE VTRIKGQHLN DRNAIVNGRV KGKINVTRAF GVAYLKQPKW
501: NSRLLEAFKI NYVGTDPYVT CAPSLCHHRI GSQDKFLVLS SDGLYQFFTN KEVVDQVEAF TAAEPDGDPA QHLVGELVNR AARKAGMETR QLLDIPRGAR
601: RHYHDDVSII VISFEGRIWR SSV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.