Factsheet for TraesCS4D01G357800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	91.07	90.62
TraesCS4B01G381900.1	Wheat	plastid	86.94	86.37
TraesCS4B01G382400.1	Wheat	cytosol	31.74	81.36
HORVU4Hr1G090650.1	Barley	cytosol, nucleus, peroxisome, plastid	76.53	75.53
Zm00001d028615_P001	Maize	nucleus	60.33	58.59
Zm00001d047807_P001	Maize	cytosol	59.34	58.47
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	59.34	58.18
Os03t0275100-02	Rice	cytosol, peroxisome, plastid	60.0	57.53
OQU92823	Sorghum	plastid	48.1	54.19
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	40.83	38.71
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	34.55	35.01
TraesCS7D01G524700.1	Wheat	mitochondrion	18.51	28.57
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	17.52	27.04
TraesCS3D01G544100.1	Wheat	mitochondrion	16.86	26.42
TraesCS2D01G288400.1	Wheat	nucleus	23.64	26.24
TraesCS4D01G331100.1	Wheat	mitochondrion	16.53	25.06
TraesCS2D01G456600.2	Wheat	mitochondrion	15.21	23.59
TraesCS5D01G085200.1	Wheat	mitochondrion	14.88	23.5
TraesCS5D01G408500.1	Wheat	mitochondrion	14.21	23.12
TraesCS5D01G510100.1	Wheat	plastid	14.71	23.12
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	14.71	22.88

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4D01G357800	EnsemblPlants:TraesCS4D01G357800.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr4D:-:505989453..505992380

Molecular Weight (calculated)

66169.4 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.312

Length

605 amino acids

Sequence
(BLAST)

001: MGNGISKNTC FSGETYAPAV SSDPVPGDIH GHSFKYVPMA VAFDKSPMAN VLSSKTPLFS LFGAAINANQ ATSSSIPSFR LLNELMVPQS SVCTVKSSCS
101: SAAAPVQAQP TRLSFSGHFL DSSGTVSPIS NQLSRRPFMS GMLDHSFSSS SPFVSHRDSV SHLMVEHGAI GSQCCNEQPL KKSLATVGSR LDFSVPRNNL
201: LSKGPTEVSN MDSFGDGGHR SPPIDNVQWA QGMAGEDRFQ VAVSEERGWV FVGIYDGFFG PDATDYLFAN LHVAVHHALK GVLSDNIQCN EPTTNSGNLF
301: SLNGGNHSPE FERKPAKRGR TEHPEKNNSA MSGGSPTMHQ RVLGALAWAL RETEEAFFKA AEEGAADNPE IGLMGSCVLV MLMKGENVYV MNVGNSRAVL
401: ARRPEPNLDN ILGKATEKDL QQLKAEIMDG LQSVQLNAEH STSVEEEVKR IKAEHIDRNA IIHGRVKGKL NITRAFGAGY LKEPKWNSML LACFKIDYIG
501: KDPYINCIPS LHHHRIGPND KFLVLSSDGL YQYFTNKEVV DEVEMFTAAY PKGNPAEHLI REVLLRAARK AGMDYHELLN ISYDERRRYH DDVSIIVISF
601: KAHAP

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.