Factsheet for TraesCS2D01G288400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G307000.1	Wheat	nucleus	93.39	98.07
TraesCS2A01G290500.1	Wheat	nucleus	93.03	97.69
HORVU2Hr1G071850.2	Barley	nucleus	92.84	97.5
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	82.75	86.73
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	81.65	85.41
EES12087	Sorghum	cytosol	81.28	85.03
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	80.37	84.07
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	52.48	59.96
Bra022166.1-P	Field mustard	cytosol	25.32	59.23
VIT_01s0150g00510.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	53.76	55.92
PGSC0003DMT400011807	Potato	nucleus	49.72	54.64
CDY43107	Canola	cytosol, nucleus, peroxisome	48.26	53.67
KRH50856	Soybean	cytosol, nucleus, peroxisome	51.01	53.46
KRH37115	Soybean	cytosol, nucleus, peroxisome	40.0	53.3
AT3G16560.1	Thale cress	cytosol, nucleus, peroxisome	48.07	53.14
CDX92079	Canola	cytosol, nucleus, peroxisome	48.26	53.02
KRH02249	Soybean	cytosol, nucleus, peroxisome	50.83	52.86
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	48.99	51.25
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	28.99	49.84
Solyc12g099600.1.1	Tomato	plasma membrane	49.91	47.3
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	30.46	27.81
TraesCS5D01G510100.1	Wheat	plastid	18.72	26.49
TraesCS3D01G544100.1	Wheat	mitochondrion	18.17	25.65
TraesCS4D01G331100.1	Wheat	mitochondrion	18.72	25.56
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	29.91	25.55
TraesCS5D01G408500.1	Wheat	mitochondrion	17.43	25.54
TraesCS7D01G524700.1	Wheat	mitochondrion	18.35	25.51
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	18.35	25.51
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	17.98	25.19
TraesCS5D01G085200.1	Wheat	mitochondrion	16.7	23.76
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	26.24	23.64
TraesCS2D01G456600.2	Wheat	mitochondrion	16.88	23.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF309	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS2D01G288400	EnsemblPlants:TraesCS2D01G288400.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:369480945..369483496

Molecular Weight (calculated)

60184.4 Da

IEP (calculated)

4.632

GRAVY (calculated)

-0.180

Length

545 amino acids

Sequence
(BLAST)

001: MVDDLFYEGN TDHSVSSEDE DTLVRSCSNL SVSFGYHCNS YQSFPLENDE HDTSPQMRFE TNAMTKSRNG SFTCLSGAAI SANFTLANTN ICKGLIGEEI
101: LPELDSPNSF RKIVSSPSMS RLDLLSTSQG SPASTESSIF EISKNLWRSS APTTVSSNFL TGTEVKMAGG AAGEDRVQAV CSEKNGWLIC GIYDGFNGRD
201: AADFLAVTLY DNIVYYLYLL ECRIKQQDGL CSSSEDSLNG VKSELTLAME IAENEDVKLS ESFRSGVLNC LTSAVEQAEN DFLCMVEQDM DDRPDLVSVG
301: SCVLVVLLQG TDLCILNLGD SRAVLASMPY AEMDTVKATQ LTEIHSLENP LEYQKLLADH PNDSKVVMGN KVKGKLKVTR AFGVGYLKQK KFNDALMGIL
401: RVRNLCSPPY VYTNPHTLSH KVMEDDLFVV LGSDGLFDFF SNDEVVQLVY QFMHDNPTGD PAKYLIEQVV HKAAKEAALT AEQLMRIPVG SRRKYHDDVT
501: VIVIILGNAR RTLYRSEDKM ETGRGSMKKT SLVCWVLLSL RDAFA

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.