Factsheet for TraesCS5D01G408500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G404000.2	Wheat	mitochondrion	99.19	98.14
TraesCS5A01G398900.1	Wheat	mitochondrion	98.66	96.58
KXG37497	Sorghum	mitochondrion	85.22	84.08
Os03t0761100-01	Rice	mitochondrion	85.75	83.95
Zm00001d013220_P001	Maize	mitochondrion	82.8	83.92
Zm00001d034109_P001	Maize	mitochondrion	84.41	83.51
HORVU5Hr1G097060.3	Barley	plastid	87.1	83.29
TraesCS5D01G085200.1	Wheat	mitochondrion	58.6	56.92
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	53.76	51.41
TraesCS2D01G456600.2	Wheat	mitochondrion	49.46	47.18
TraesCS4D01G331100.1	Wheat	mitochondrion	49.46	46.12
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	47.58	45.15
TraesCS3D01G544100.1	Wheat	mitochondrion	45.97	44.3
TraesCS7D01G524700.1	Wheat	mitochondrion	46.24	43.88
TraesCS5D01G510100.1	Wheat	plastid	44.09	42.6
TraesCS2D01G288400.1	Wheat	nucleus	25.54	17.43
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	27.69	17.25
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	26.34	15.36
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	23.12	14.21

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF292	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5D01G408500
EnsemblPlants:TraesCS5D01G408500.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:473001000..473003580

Molecular Weight (calculated)

40633.4 Da

IEP (calculated)

9.413

GRAVY (calculated)

-0.224

Length

372 amino acids

Sequence
(BLAST)

001: MLRAVARCCG HWPPGAAAAD GMLWQTELRP HAAGEFSMAA AQANLVMEDQ AQVLASPSAT LVGVYDGHGG PDASRFLRSA LFPHVQRFAK EQGGVTAEAI
101: RRAFGAAEED FLHEVRQAWP KRPRMAAVGS CCLLGAIAGD TLYVANLGDS RAVLGRRVVG GGVAVAERLS TDHNVASEEV RMEVSSHNPD DAQIVVHTRG
201: AWRIKGIIQV SRSIGDVYLK KPEYSLDPLF RQIGPVIALK RPALSAEPQI HVRKLKPNDQ FIIFASDGLW EHLSDDAAVQ IVFKNPRTGI ANRLVRAALK
301: EATKKREVSV HDLRTIERGV RRHFHDDISV VVVYLDRHRG RRQTRVVDSS SNCTSAPVDV YSSSSSAYRD SG

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.