Factsheet for TraesCS4D01G331100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G505300.1	Wheat	mitochondrion	99.25	99.25
TraesCS4B01G335500.1	Wheat	mitochondrion	99.0	98.75
HORVU4Hr1G080570.1	Barley	mitochondrion	98.75	98.75
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	87.22	87.22
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	77.69	86.83
Zm00001d027571_P003	Maize	cytosol	86.72	86.72
Os03t0137200-01	Rice	mitochondrion	86.72	86.72
EER95550	Sorghum	mitochondrion, peroxisome, plastid	84.21	84.21
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	86.22	82.49
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	76.19	77.55
Solyc10g055650.1.1	Tomato	cytosol	63.91	75.22
PGSC0003DMT400068706	Potato	mitochondrion	69.92	72.85
CDY16313	Canola	extracellular	68.17	72.15
VIT_03s0038g02650.t01	Wine grape	mitochondrion	71.68	72.04
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	69.67	71.65
PGSC0003DMT400046486	Potato	mitochondrion	69.67	71.65
KRG90665	Soybean	mitochondrion	71.18	71.54
KRH36089	Soybean	cytosol	71.18	71.54
CDY33283	Canola	plastid	68.42	71.47
Bra038895.1-P	Field mustard	plastid	68.42	71.47
PGSC0003DMT400058098	Potato	mitochondrion	70.68	71.03
Solyc03g033340.2.1	Tomato	mitochondrion	70.43	70.78
CDX73725	Canola	vacuole	66.67	70.56
PGSC0003DMT400009248	Potato	mitochondrion	68.92	70.51
KRH07984	Soybean	mitochondrion	69.17	70.05
KRH69725	Soybean	mitochondrion	69.17	70.05
Solyc02g083420.2.1	Tomato	mitochondrion	68.17	69.74
AT3G51370.1	Thale cress	cytosol, extracellular	66.17	69.66
TraesCS7D01G524700.1	Wheat	mitochondrion	68.17	69.39
AT5G66080.1	Thale cress	plastid	66.67	69.09
CDY12086	Canola	cytosol, mitochondrion, nucleus	65.16	68.42
Bra010741.1-P	Field mustard	plastid	64.91	68.16
CDX90277	Canola	cytosol, mitochondrion, nucleus	64.91	68.16
AT4G38520.1	Thale cress	mitochondrion	67.17	67.0
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	66.42	66.75
VIT_00s0434g00020.t01	Wine grape	cytosol	65.66	64.22
CDY54807	Canola	nucleus, peroxisome, plastid	62.66	64.1
CDY70696	Canola	extracellular, peroxisome	51.63	63.58
TraesCS3D01G544100.1	Wheat	mitochondrion	59.65	61.66
CDY29015	Canola	cytosol	50.13	55.56
TraesCS2D01G456600.2	Wheat	mitochondrion	52.38	53.59
CDX78002	Canola	vacuole	66.17	52.91
Bra036813.1-P	Field mustard	vacuole	66.17	52.91
TraesCS5D01G408500.1	Wheat	mitochondrion	46.12	49.46
TraesCS5D01G510100.1	Wheat	plastid	47.37	49.09
TraesCS5D01G085200.1	Wheat	mitochondrion	45.61	47.52
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	41.85	42.93
TraesCS2D01G288400.1	Wheat	nucleus	25.56	18.72
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	27.82	18.59
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	26.82	16.77
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	25.06	16.53

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF342	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4D01G331100
EnsemblPlants:TraesCS4D01G331100.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:489175375..489178286

Molecular Weight (calculated)

43702.1 Da

IEP (calculated)

9.613

GRAVY (calculated)

-0.272

Length

399 amino acids

Sequence
(BLAST)

001: MAAVMDYFRS CWGARSRAGR RGKKGSDAAG RQDGLLWYKD AGQAATGDFS MAVVQANNLL EDQSQVESGS LSMADPGPQG TFVGVYDGHG GPETSRFIND
101: NMFHHLRRFA TEHKCMSADV IRKAFQATED GFLSVVSKEW SVKPQIAAVG SCCLVGVICS GTLYIANAGD SRAVLGRLVK ATGQVVAMQL SAEHNACYEE
201: VRQELQSSHP HDPQIVVLKH NVWRVKGLIQ ISRSIGDVYL KRPEYNRSPL HSKFRLRETF KKPILSSEPA IAVHQIQPSD QFVIFASDGL WEHLSNQEAV
301: DLVQSNPRNG IARKLVKAAM QEAAKKREMR YSDLKKIERG VRRHFHDDIT VVVVFLDASA VSRAGWSKSP SVSVRGGGVS VPANSLAPFS APAMVSSTY

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.