Factsheet for PGSC0003DMT400058098

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g033340.2.1	Tomato	mitochondrion	98.74	98.74
PGSC0003DMT400009248	Potato	mitochondrion	87.15	88.72
GSMUA_Achr3P00610_001	Banana	cytosol	71.54	81.61
GSMUA_Achr4P04870_001	Banana	cytosol	68.51	79.53
KRH69725	Soybean	mitochondrion	78.34	78.93
PGSC0003DMT400046486	Potato	mitochondrion	77.08	78.87
KRH07984	Soybean	mitochondrion	78.09	78.68
GSMUA_Achr3P26820_001	Banana	mitochondrion	78.09	78.68
Os06t0717800-01	Rice	mitochondrion	76.83	77.81
EER90402	Sorghum	mitochondrion	76.07	77.64
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	77.08	77.08
PGSC0003DMT400068706	Potato	mitochondrion	74.06	76.76
CDY16313	Canola	extracellular	72.8	76.66
Zm00001d014797_P001	Maize	mitochondrion	76.07	76.65
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	68.51	76.19
AT3G51370.1	Thale cress	cytosol, extracellular	72.54	75.99
CDX73725	Canola	vacuole	72.04	75.86
CDY33283	Canola	plastid	72.8	75.65
Bra038895.1-P	Field mustard	plastid	72.8	75.65
TraesCS7D01G524700.1	Wheat	mitochondrion	73.8	74.74
HORVU7Hr1G117970.1	Barley	mitochondrion	73.8	74.74
TraesCS7B01G455500.1	Wheat	mitochondrion	73.55	74.49
TraesCS7A01G537000.1	Wheat	mitochondrion	73.55	74.49
GSMUA_Achr5P11520_001	Banana	mitochondrion	74.06	74.24
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	74.56	74.19
AT5G66080.1	Thale cress	plastid	71.54	73.77
Os03t0137200-01	Rice	mitochondrion	73.8	73.43
Zm00001d027571_P003	Maize	cytosol	73.8	73.43
GSMUA_Achr8P13120_001	Banana	cytosol	71.54	72.45
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	75.06	71.46
EER95550	Sorghum	mitochondrion, peroxisome, plastid	71.79	71.43
VIT_00s0434g00020.t01	Wine grape	cytosol	73.05	71.08
Os10t0544900-01	Rice	plastid	70.28	70.99
HORVU4Hr1G080570.1	Barley	mitochondrion	71.28	70.93
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	68.26	70.76
EER94559	Sorghum	cytosol	70.03	70.74
TraesCS4D01G331100.1	Wheat	mitochondrion	71.03	70.68
TraesCS5A01G505300.1	Wheat	mitochondrion	71.03	70.68
AT4G38520.1	Thale cress	mitochondrion	71.03	70.5
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	70.53	70.35
TraesCS4B01G335500.1	Wheat	mitochondrion	70.78	70.25
GSMUA_Achr9P24110_001	Banana	cytosol	70.78	70.25
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	69.77	69.77
CDX90277	Canola	cytosol, mitochondrion, nucleus	66.75	69.74
CDY12086	Canola	cytosol, mitochondrion, nucleus	66.75	69.74
Bra010741.1-P	Field mustard	plastid	66.25	69.21
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	67.76	68.62
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	67.76	68.62
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	67.76	68.62
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	68.26	67.92
CDY54807	Canola	nucleus, peroxisome, plastid	66.25	67.44
CDY70696	Canola	extracellular, peroxisome	54.66	66.98
PGSC0003DMT400005115	Potato	cytosol	61.46	64.55
PGSC0003DMT400028715	Potato	cytosol	60.71	64.1
PGSC0003DMT400060005	Potato	cytosol	60.71	62.76
CDY29015	Canola	cytosol	55.16	60.83
CDX78002	Canola	vacuole	71.54	56.91
Bra036813.1-P	Field mustard	vacuole	71.54	56.91
Zm00001d036395_P008	Maize	mitochondrion	75.06	56.02
PGSC0003DMT400067223	Potato	mitochondrion	52.39	55.62
PGSC0003DMT400066175	Potato	cytosol	48.36	51.2
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	47.61	50.94
PGSC0003DMT400064207	Potato	cytosol	46.1	49.19
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	42.07	43.26
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	40.3	41.03
PGSC0003DMT400029765	Potato	mitochondrion	39.8	38.63
PGSC0003DMT400029770	Potato	mitochondrion	36.78	34.27
PGSC0003DMT400029776	Potato	cytosol	15.11	32.61
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	28.21	21.5
PGSC0003DMT400011807	Potato	nucleus	25.69	20.56
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	29.22	19.33
PGSC0003DMT400078173	Potato	nucleus	31.74	17.7
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	27.71	17.43
PGSC0003DMT400052881	Potato	nucleus	29.97	15.24
PGSC0003DMT400045127	Potato	nucleus	28.97	14.41
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	8.06	9.41

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102580586	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1C237	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400022551
PGSC:PGSC0003DMG400022551	EnsemblPlants:PGSC0003DMT400058098	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF237	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000296B1B3	RefSeq:XP_006343345.1	RefSeq:XP_006343346.1	SEG:seg	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400022551]

Coordinates

chr3:-:3333679..3340256

Molecular Weight (calculated)

44014.7 Da

IEP (calculated)

7.864

GRAVY (calculated)

-0.225

Length

397 amino acids

Sequence
(BLAST)

001: MLSRLINFLK ACWRPSSDHS VHAGSDAAGR QDGLFWYKDS GQHLIGEFSM AVVQANNLLE DQSQIESGSL SLLDSGPYGT FAGIYDGHGG PETSRYINDH
101: LFQNLKRFAA EQNSMSVDVI RKAFQATEDG FCSVVAKQWP MKPQMAAVGS CCLVVVICNG ILYVANLGDS RAVLGRLVRA TGEVLAIQLS AEHNACFETV
201: RQELHSMHPD DPQIVVLKHN VWRVKGLIQI SRSIGDIYLK KPEYNREPLY AKFRLREPFK RPILSSDPSI TVQELEPHDQ FLILASDGLW EHLSNQEAVD
301: IVQNSPRSGS ARRLVKTALQ EAAKKREMRY SDLKKIDRGV RRHFHDDISV IVVFLDSDLV SKASSLRGPS LSLRGGGMNF PAKSLAPCAT PIELGTT

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.