Factsheet for PGSC0003DMT400029763

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	64.87	65.54
PGSC0003DMT400029765	Potato	mitochondrion	68.21	65.04
VIT_08s0007g06510.t01	Wine grape	mitochondrion	55.13	55.13
KRH38102	Soybean	mitochondrion	52.05	52.73
PGSC0003DMT400029770	Potato	mitochondrion	57.44	52.58
KRH71850	Soybean	mitochondrion	49.23	52.46
PGSC0003DMT400029776	Potato	cytosol	24.62	52.17
GSMUA_Achr8P13470_001	Banana	mitochondrion	50.77	51.83
AT5G06750.3	Thale cress	cytosol, mitochondrion	51.79	51.4
KRG95384	Soybean	mitochondrion	51.28	51.15
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	51.03	51.03
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	51.03	51.03
TraesCS2D01G456600.2	Wheat	mitochondrion	50.77	50.77
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	50.51	50.51
Bra009224.1-P	Field mustard	cytosol, mitochondrion	44.62	50.43
KXG30997	Sorghum	mitochondrion	50.0	50.26
Os02t0685600-01	Rice	mitochondrion, plasma membrane	49.74	50.13
Bra028720.1-P	Field mustard	mitochondrion	49.23	50.0
KXG26992	Sorghum	cytosol, mitochondrion	50.0	49.62
PGSC0003DMT400068706	Potato	mitochondrion	45.13	45.95
PGSC0003DMT400009248	Potato	mitochondrion	43.59	43.59
PGSC0003DMT400046486	Potato	mitochondrion	43.08	43.3
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	41.03	43.13
PGSC0003DMT400066175	Potato	cytosol	41.28	42.93
PGSC0003DMT400028715	Potato	cytosol	40.77	42.29
CDY40818	Canola	mitochondrion	13.33	41.27
PGSC0003DMT400064207	Potato	cytosol	38.72	40.59
PGSC0003DMT400060005	Potato	cytosol	39.74	40.36
PGSC0003DMT400058098	Potato	mitochondrion	41.03	40.3
PGSC0003DMT400005115	Potato	cytosol	38.46	39.68
PGSC0003DMT400067223	Potato	mitochondrion	37.95	39.57
CDY51276	Canola	mitochondrion	7.95	37.35
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	25.38	19.0
PGSC0003DMT400011807	Potato	nucleus	23.85	18.75
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	25.9	16.83
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	25.64	15.85
PGSC0003DMT400078173	Potato	nucleus	27.95	15.31
PGSC0003DMT400045127	Potato	nucleus	26.92	13.16
PGSC0003DMT400052881	Potato	nucleus	25.9	12.93
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	6.67	7.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102603804	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1ATD4	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400011440
PGSC:PGSC0003DMG400011440	EnsemblPlants:PGSC0003DMT400029763	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000296577E	RefSeq:XP_006362222.1	:	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400011440]

Coordinates

chr10:+:58920720..58922388

Molecular Weight (calculated)

43994.5 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.255

Length

390 amino acids

Sequence
(BLAST)

001: MFRWLERIVL ACCEPLSRYL PSSRGEDYPL LWHKDLEKHS CGKFSCAMVQ GNPVCEDYGH VEPGRQGTFV GIYDGHGGPQ ASRFACDHLS RHLIRFARAR
101: GTIDEEVLNN AVAATEEAFL DYVRERFEAD PLIASKGCCC LVGVIWNGTL YVANLGDSRA VLGHDHIERP DRIVALQLTN DHNASIVQVR NELNASHPDN
201: PNIVVYVNEA WRVRGIIQIT RALGDAYLKH QEFALGTNFP RFHLKVPITR PVVRADPEVS SRNLQAVDRF VIFASDGLWD LLTNEKAVEI VNTYPKKGIA
301: RRLLVSALDE AARRVKIKYD ELKKVGINER RTFHDDITVV VIFIDHSMLN RELSVPGMSV QGFVDAAPRR SEFNIVQQQP GSEEELDDMP

Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.