Factsheet for GSMUA_Achr8P13470_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
peroxisome 2
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017643_P001	Maize	mitochondrion	77.49	76.49
Os02t0685600-01	Rice	mitochondrion, plasma membrane	76.7	75.71
VIT_08s0007g06510.t01	Wine grape	mitochondrion	77.23	75.64
KXG30997	Sorghum	mitochondrion	75.92	74.74
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	75.39	73.85
TraesCS2D01G456600.2	Wheat	mitochondrion	75.13	73.59
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	74.61	73.08
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	74.61	73.08
KRH71850	Soybean	mitochondrion	69.37	72.4
Zm00001d002542_P001	Maize	cytosol, mitochondrion	73.82	71.94
KRH38102	Soybean	mitochondrion	71.99	71.43
KXG26992	Sorghum	cytosol, mitochondrion	72.77	70.74
CDY14069	Canola	cytosol, mitochondrion	68.85	67.26
Bra028720.1-P	Field mustard	mitochondrion	67.02	66.67
AT5G06750.3	Thale cress	cytosol, mitochondrion	68.59	66.67
CDX98953	Canola	cytosol, mitochondrion	66.75	66.58
CDY05001	Canola	cytosol, mitochondrion	68.06	66.5
CDX70071	Canola	cytosol, mitochondrion	66.23	66.06
Bra009224.1-P	Field mustard	cytosol, mitochondrion	58.64	64.93
GSMUA_Achr6P23480_001	Banana	cytosol	48.95	55.99
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	56.02	55.44
GSMUA_Achr4P04870_001	Banana	cytosol	49.48	55.26
GSMUA_Achr3P00610_001	Banana	cytosol	49.74	54.6
GSMUA_Achr5P11520_001	Banana	mitochondrion	56.54	54.55
GSMUA_Achr6P11170_001	Banana	cytosol	53.66	54.52
GSMUA_Achr10P...	Banana	cytosol	52.88	53.72
GSMUA_Achr6P15470_001	Banana	mitochondrion	53.14	53.56
GSMUA_Achr11P...	Banana	mitochondrion	51.83	52.38
GSMUA_Achr3P02220_001	Banana	mitochondrion	51.31	52.13
GSMUA_Achr4P14220_001	Banana	mitochondrion	50.79	52.01
GSMUA_Achr8P13120_001	Banana	cytosol	52.88	51.53
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	53.4	51.39
GSMUA_Achr2P02070_001	Banana	mitochondrion	50.0	51.34
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	51.83	50.77
GSMUA_Achr3P26820_001	Banana	mitochondrion	52.36	50.76
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	50.52	50.39
GSMUA_Achr2P21550_001	Banana	mitochondrion	50.52	50.0
PGSC0003DMT400029765	Potato	mitochondrion	52.36	48.9
GSMUA_Achr9P24110_001	Banana	cytosol	50.0	47.75
Solyc10g078810.1.1	Tomato	cytosol	54.45	47.49
Solyc10g078820.1.1	Tomato	mitochondrion	55.24	45.87
PGSC0003DMT400029770	Potato	mitochondrion	49.21	44.13
PGSC0003DMT400029776	Potato	cytosol	18.32	38.04
GSMUA_Achr10P...	Banana	cytosol	24.35	26.2
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	26.96	21.59
GSMUA_Achr5P29080_001	Banana	mitochondrion	29.84	19.76
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	29.58	19.69
GSMUA_Achr2P16350_001	Banana	mitochondrion	28.27	19.39
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	28.27	18.52
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	28.27	17.73
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	29.06	17.65
GSMUA_Achr5P13850_001	Banana	nucleus	27.75	17.43
Solyc10g078800.1.1	Tomato	mitochondrion	52.09	15.17
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	28.8	14.78

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr8G13470_001	EnsemblPlants:GSMUA_Achr8P13470_001	EnsemblPlants:GSMUA_Achr8T13470_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0TQ50
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002956CA0
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 25 [Source:GMGC_GENE;Acc:GSMUA_Achr8G13470_001]

Coordinates

chr8:-:10202498..10206346

Molecular Weight (calculated)

43251.6 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.241

Length

382 amino acids

Sequence
(BLAST)

001: MFSWMGRFVA ACWAPVRRYA RMSKDEEEED DDALLWSRDI GQHAAGDFSF AVVQANEVLE DHSQVETGRD ATFVGVYDGH GGADASRFIS NHLFLHLMRL
101: AQESGTISED VVRSAFSATE EGFLAHVRRT HQIKPLISAI GSCCLVGVIW RGTLYLANLG DSRAVIGYLG RSNNIIAEQL TRDHNACMEE VRQELRSLHP
201: DDSNIVVLKH GVWRIKGIIQ VSRTIGDAYL KKPEFAIDPS VTRFRLTEPL RRPVLTAEPS IHMRVLRPQD KFLVFASDGL WEHLSNQQAV EIVYNHPREG
301: IARRLVRTAL QEAARKREMR YADLKKVEKG IRRFFHDDIT VIVIYIDHEF LREPNASVAE LSIRGFVDAV GPSNFSMLDG QN

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.