Factsheet for Bra028720.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05001	Canola	cytosol, mitochondrion	98.7	96.93
AT5G06750.3	Thale cress	cytosol, mitochondrion	89.84	87.79
Bra009224.1-P	Field mustard	cytosol, mitochondrion	74.74	83.19
VIT_08s0007g06510.t01	Wine grape	mitochondrion	69.01	67.95
GSMUA_Achr8P13470_001	Banana	mitochondrion	66.67	67.02
Zm00001d017643_P001	Maize	mitochondrion	66.67	66.15
Os02t0685600-01	Rice	mitochondrion, plasma membrane	65.89	65.37
KXG30997	Sorghum	mitochondrion	65.89	65.21
KRG95384	Soybean	mitochondrion	64.06	62.92
TraesCS2D01G456600.2	Wheat	mitochondrion	63.8	62.82
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.54	62.56
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.28	62.31
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	63.02	62.05
KXG26992	Sorghum	cytosol, mitochondrion	62.24	60.81
Zm00001d002542_P001	Maize	cytosol, mitochondrion	60.68	59.44
Bra010741.1-P	Field mustard	plastid	52.86	53.42
Bra038895.1-P	Field mustard	plastid	52.34	52.62
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	52.6	50.88
Bra036972.1-P	Field mustard	mitochondrion	49.48	50.8
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	51.3	50.77
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	50.52	50.26
Bra028865.1-P	Field mustard	mitochondrion	46.61	49.72
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	50.0	49.61
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	49.22	49.48
Bra005755.1-P	Field mustard	cytosol	45.83	49.3
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	50.0	49.23
Bra021218.1-P	Field mustard	plastid	48.44	49.21
Bra007131.1-P	Field mustard	mitochondrion	49.22	48.84
Bra034592.1-P	Field mustard	mitochondrion	48.7	48.57
Bra009569.1-P	Field mustard	mitochondrion	45.83	48.48
PGSC0003DMT400029765	Potato	mitochondrion	50.26	47.19
Solyc10g078810.1.1	Tomato	cytosol	49.48	43.38
Solyc10g078820.1.1	Tomato	mitochondrion	50.52	42.17
Bra036813.1-P	Field mustard	vacuole	53.91	41.48
PGSC0003DMT400029770	Potato	mitochondrion	44.53	40.14
PGSC0003DMT400029776	Potato	cytosol	17.97	37.5
Bra022166.1-P	Field mustard	cytosol	21.61	35.62
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	20.05	28.73
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	28.65	19.0
Bra041012.1-P	Field mustard	nucleus	28.91	16.37
Bra029766.1-P	Field mustard	nucleus	26.3	15.68
Bra001308.1-P	Field mustard	nucleus	26.56	14.91
Solyc10g078800.1.1	Tomato	mitochondrion	48.7	14.25
Bra017322.1-P	Field mustard	nucleus	26.3	13.69
Bra005350.1-P	Field mustard	mitochondrion, plastid	26.3	13.56
Bra009593.1-P	Field mustard	nucleus	27.86	13.31
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	27.86	12.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra028720	EnsemblPlants:Bra028720.1
EnsemblPlants:Bra028720.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4EIV5
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000254318D
SEG:seg	:	:	:	:	:

Description

AT5G06750 (E=1e-190) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA02:-:2386022..2387852

Molecular Weight (calculated)

43158.6 Da

IEP (calculated)

7.245

GRAVY (calculated)

-0.285

Length

384 amino acids

Sequence
(BLAST)

001: MALFCLRPMR RYGRMNRDDD EEEDDHEDSS GGDSLLWSRE LERHSFGDFS MAVVQANEVV EDHSQVETGK GAVFVGVYDG HGGPEASRYI SDHLFGHLMR
101: LSKEHGGITE ETLRAAYSAT EEGFLTLVRR TCSLKPLIAA VGSCCLVGVI WKGTLLIANV GDSRAVLGSM SSTNRSNKIA AEQLTSDHNA ALEEVRQELK
201: SLHHDDPHIV VLKHGVWRIK GIIQVSRSIG DAYLKRPEFS LDPSFPKFHL TERLQRPVLS AEPCVYTRVL QTSDKFVIFA SDGLWEQMSN QQAVEIVNKH
301: PRPGIARRLV RRAMSIAAKK REMRYDDLKK VERGVRRFFH DDITVVVVFV DSELLMVEKA TVPELSVKGF SRTVGPSKFS IFFS

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.