Factsheet for Bra036972.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010714.1-P
Bra032097.1-P
Bra033597.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	Bra032097.1-P	AT2G24400.1	21798944
AT4G33920.1	Bra010714.1-P	AT4G39050.1	21798944
AT4G33920.1	Bra033597.1-P	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49385	Canola	mitochondrion	98.93	98.93
AT4G33920.1	Thale cress	mitochondrion	88.5	87.11
Bra034592.1-P	Field mustard	mitochondrion	89.57	87.01
KRH35699	Soybean	mitochondrion	70.86	70.11
VIT_03s0091g00470.t01	Wine grape	mitochondrion	71.12	69.82
KRG91074	Soybean	cytosol, mitochondrion	69.52	69.71
PGSC0003DMT400066175	Potato	cytosol	67.91	67.73
Solyc01g107300.2.1	Tomato	cytosol	41.44	67.69
GSMUA_Achr6P11170_001	Banana	cytosol	67.65	67.29
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	66.58	67.12
VIT_07s0129g00520.t01	Wine grape	cytosol	67.38	65.62
VIT_18s0001g09390.t01	Wine grape	mitochondrion	66.31	65.61
GSMUA_Achr3P02220_001	Banana	mitochondrion	64.97	64.63
KRH28403	Soybean	cytosol	64.71	64.53
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	65.51	64.47
KRH77072	Soybean	cytosol	64.44	63.93
GSMUA_Achr2P21550_001	Banana	mitochondrion	65.51	63.47
Os12t0580900-01	Rice	mitochondrion	66.31	63.27
TraesCS5B01G078500.1	Wheat	mitochondrion	63.37	61.88
HORVU5Hr1G018930.2	Barley	mitochondrion	63.1	61.62
TraesCS5D01G085200.1	Wheat	mitochondrion	63.1	61.62
GSMUA_Achr4P14220_001	Banana	mitochondrion	61.23	61.39
TraesCS5A01G072500.1	Wheat	mitochondrion	62.3	60.84
Solyc01g107310.2.1	Tomato	mitochondrion	29.41	59.46
Zm00001d048131_P001	Maize	cytosol	57.22	54.73
Os03t0207400-01	Rice	mitochondrion	56.95	54.34
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	55.88	53.73
EER95306	Sorghum	mitochondrion	55.88	53.32
Bra010741.1-P	Field mustard	plastid	51.6	50.79
Bra038895.1-P	Field mustard	plastid	51.6	50.52
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	52.67	49.62
Bra028720.1-P	Field mustard	mitochondrion	50.8	49.48
TraesCS4A01G050000.1	Wheat	plastid	56.42	49.3
TraesCS4B01G254700.1	Wheat	plastid	55.62	48.83
Bra021218.1-P	Field mustard	plastid	49.2	48.68
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	49.47	48.43
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	50.0	48.2
Bra005755.1-P	Field mustard	cytosol	45.72	47.9
Bra028865.1-P	Field mustard	mitochondrion	45.99	47.78
Bra009569.1-P	Field mustard	mitochondrion	46.26	47.66
Bra007131.1-P	Field mustard	mitochondrion	49.2	47.55
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	48.93	47.29
HORVU4Hr1G069380.3	Barley	peroxisome	29.95	46.86
Bra009224.1-P	Field mustard	cytosol, mitochondrion	42.25	45.8
Bra036813.1-P	Field mustard	vacuole	51.6	38.68
Bra022166.1-P	Field mustard	cytosol	19.52	31.33
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.52	27.24
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	26.74	17.27
Bra029766.1-P	Field mustard	nucleus	26.74	15.53
Bra041012.1-P	Field mustard	nucleus	27.01	14.9
Bra001308.1-P	Field mustard	nucleus	27.01	14.77
Bra017322.1-P	Field mustard	nucleus	25.67	13.01
Bra005350.1-P	Field mustard	mitochondrion, plastid	25.13	12.62
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	28.61	12.59
Bra009593.1-P	Field mustard	nucleus	26.47	12.31

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra036972	EnsemblPlants:Bra036972.1
EnsemblPlants:Bra036972.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4F7B2
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF362	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000254116F
SEG:seg	:	:	:	:	:

Description

AT4G33920 (E=2e-169) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA03:-:29180659..29182357

Molecular Weight (calculated)

41949.6 Da

IEP (calculated)

9.762

GRAVY (calculated)

-0.305

Length

374 amino acids

Sequence
(BLAST)

001: MLRALVRPLE RWCPGSRASG DNLLWQSELR PHAGGEYSIA VVQANSRLED QSQVFTSSSA TYVGVYDGHG GPEASRFVNR HLFPHIHKFA KEEGGISPDV
101: IKRAFKETEE DFCHMVQRSL PLKPQMATVG TCCLFGAITN GTLYVANLGD SRAVLGRVVS GVAVAERLST DHNVAVEEVR KEVKALNPDD SQIVMYIRGV
201: WRIKGIIQVS RSIGDVYLKK PEFYRDPVFQ QHGNPIPLRR PAMTAEPSII VRKLKPQDLF IIFASDGLWE HLSDEAAVEI VLKHPRAGIA RRLVRAALEE
301: AAKKREMRYG DMKKIARGVR RHFHDDISVV VVYLDQHKPK NGKLIQQGGI TAPSDIYSLR SDEAKQRQLL NVLY

Best Arabidopsis Sequence Match ( AT4G33920.1 )
(BLAST)

001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY

Arabidopsis Description

Probable protein phosphatase 2C 63 [Source:UniProtKB/Swiss-Prot;Acc:O81760]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.