Factsheet for Bra041012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71973	Canola	cytosol, nucleus, peroxisome	76.84	98.12
CDY71801	Canola	cytosol	77.88	96.88
AT2G28890.1	Thale cress	nucleus	86.58	89.76
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	33.48	84.7
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	68.14	79.79
VIT_06s0004g04600.t01	Wine grape	nucleus	73.75	69.06
Solyc06g076100.2.1	Tomato	nucleus	70.5	67.51
KRH29800	Soybean	cytosol, nucleus, plastid	71.53	67.36
KRH24796	Soybean	nucleus	71.39	67.22
PGSC0003DMT400078173	Potato	nucleus	70.5	67.13
Bra029766.1-P	Field mustard	nucleus	46.9	49.38
Bra001308.1-P	Field mustard	nucleus	46.61	46.2
Bra022166.1-P	Field mustard	cytosol	15.04	43.78
Bra009593.1-P	Field mustard	nucleus	49.85	42.04
Bra005350.1-P	Field mustard	mitochondrion, plastid	42.04	38.26
Bra017322.1-P	Field mustard	nucleus	41.0	37.67
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	46.31	36.94
Bra028865.1-P	Field mustard	mitochondrion	17.11	32.22
Bra038895.1-P	Field mustard	plastid	17.85	31.68
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	17.7	31.41
Bra005755.1-P	Field mustard	cytosol	16.22	30.81
Bra010741.1-P	Field mustard	plastid	17.11	30.53
Bra009569.1-P	Field mustard	mitochondrion	16.22	30.3
Bra007131.1-P	Field mustard	mitochondrion	17.11	29.97
Bra009224.1-P	Field mustard	cytosol, mitochondrion	14.9	29.28
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	16.52	28.94
Bra028720.1-P	Field mustard	mitochondrion	16.37	28.91
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	16.37	28.61
Bra021218.1-P	Field mustard	plastid	15.78	28.31
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	16.52	28.21
Bra036972.1-P	Field mustard	mitochondrion	14.9	27.01
Bra034592.1-P	Field mustard	mitochondrion	15.04	26.49
Bra036813.1-P	Field mustard	vacuole	17.99	24.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	EnsemblPlantsGene:Bra041012	EnsemblPlants:Bra041012.1	EnsemblPlants:Bra041012.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006470	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0048366	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4FIT3	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000253EBBB	SEG:seg

Description

AT2G28890 (E=1e-308) PLL4 | PLL4 (POLTERGEIST LIKE 4); catalytic/ protein serine/threonine phosphatase

Coordinates

chrScaffold000375:-:7049..9366

Molecular Weight (calculated)

75593.6 Da

IEP (calculated)

5.110

GRAVY (calculated)

-0.592

Length

678 amino acids

Sequence
(BLAST)

001: MGNGITKLSK CFTGGGETRR KKEMKILEPD PLDEGPGHSF CYVRPDPTRV SSSKVHSEED TTTTTFRTIS GASVSANAAT PLSTSLYDPY GHIDRAAAFE
101: STTSFASIPL QPIPRSSGPI VPGSGPLERG FLSGPIERGF MSGPIDGLGL FSGPLGSESD QFQRSFSHGL ANRFGSRKGY LARVLRRAIS KTINRGQNSI
201: VAPVKTVKEP DWVFGSDKTR NQHHQPPHNE NLTVNSLNFS SEGSLDDDVS LESQNLQWAQ GKAGEDRVHV VVSEEHGWLF VGIYDGFNGP DAPDYLLSHL
301: YPAVHRELKG LLWDDPKLDA NPSSDCVDQD SNNSCPSENC EKKSKNDGRK STKCEESQRR WRCEWDRERL DLDRLLKEKI NKRTNGSDPD PDPNSSDVLK
401: ALSEALRKTE EAYLENADMI LHENPELALM GSCVLVMLMK GEDVYLMNVG DSRAVLGQKA ETEYWMGKIR QDLERINEET MIDFDGTCEG ERAGLVPNLS
501: AFQLTVDHST NVEEEVDRIR KEHPDDASAV SNERVKGSLK VTRAFGAGFL KQPKWNNALL EMFQIDYIGT SPYINCLPAL YHHRLGSKDQ FLILSSDGLY
601: QYFTNEEAVS EVELFITLQP EGDPAQHLVQ ELLFRAAKKA GMDFNELLEI PQGERRRYHD DVSIVVISLE GRMWKSCV

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.