Factsheet for Bra033566.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54807	Canola	nucleus, peroxisome, plastid	92.44	94.1
AT4G38520.1	Thale cress	mitochondrion	84.89	84.25
Bra010741.1-P	Field mustard	plastid	80.6	84.21
GSMUA_Achr3P00610_001	Banana	cytosol	63.98	72.99
Solyc10g055650.1.1	Tomato	cytosol	62.22	72.86
GSMUA_Achr4P04870_001	Banana	cytosol	62.72	72.81
KRG90665	Soybean	mitochondrion	72.29	72.29
KRH36089	Soybean	cytosol	72.29	72.29
PGSC0003DMT400009248	Potato	mitochondrion	70.78	72.05
PGSC0003DMT400046486	Potato	mitochondrion	70.03	71.65
PGSC0003DMT400068706	Potato	mitochondrion	69.02	71.54
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	69.77	71.39
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	63.98	71.15
VIT_03s0038g02650.t01	Wine grape	mitochondrion	71.03	71.03
Solyc02g083420.2.1	Tomato	mitochondrion	69.77	71.03
Os06t0717800-01	Rice	mitochondrion	69.27	70.15
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	69.77	69.77
Solyc03g033340.2.1	Tomato	mitochondrion	69.77	69.77
PGSC0003DMT400058098	Potato	mitochondrion	69.77	69.77
EER90402	Sorghum	mitochondrion	68.01	69.41
Bra038895.1-P	Field mustard	plastid	66.75	69.37
Os03t0137200-01	Rice	mitochondrion	69.52	69.17
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	68.26	69.13
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	68.26	69.13
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	68.26	69.13
GSMUA_Achr3P26820_001	Banana	mitochondrion	68.51	69.04
HORVU7Hr1G117970.1	Barley	mitochondrion	68.01	68.88
TraesCS7D01G524700.1	Wheat	mitochondrion	68.01	68.88
TraesCS7A01G537000.1	Wheat	mitochondrion	67.76	68.62
TraesCS7B01G455500.1	Wheat	mitochondrion	67.76	68.62
Os10t0544900-01	Rice	plastid	67.51	68.19
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	68.51	68.17
EER94559	Sorghum	cytosol	67.25	67.94
GSMUA_Achr5P11520_001	Banana	mitochondrion	67.76	67.93
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	68.01	67.84
Zm00001d014797_P001	Maize	mitochondrion	67.0	67.51
KRH69725	Soybean	mitochondrion	67.0	67.51
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	67.76	67.42
Zm00001d027571_P003	Maize	cytosol	67.25	66.92
KRH07984	Soybean	mitochondrion	66.25	66.75
TraesCS5A01G505300.1	Wheat	mitochondrion	66.75	66.42
HORVU4Hr1G080570.1	Barley	mitochondrion	66.75	66.42
TraesCS4D01G331100.1	Wheat	mitochondrion	66.75	66.42
TraesCS4B01G335500.1	Wheat	mitochondrion	66.75	66.25
EER95550	Sorghum	mitochondrion, peroxisome, plastid	66.0	65.66
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	67.76	64.51
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	62.22	64.49
GSMUA_Achr8P13120_001	Banana	cytosol	62.97	63.78
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	61.96	63.4
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	61.71	63.31
GSMUA_Achr9P24110_001	Banana	cytosol	63.73	63.25
VIT_00s0434g00020.t01	Wine grape	cytosol	64.99	63.24
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	58.44	60.73
Bra007131.1-P	Field mustard	mitochondrion	58.69	60.21
Bra028865.1-P	Field mustard	mitochondrion	51.89	57.22
Bra021218.1-P	Field mustard	plastid	54.16	56.88
Bra009569.1-P	Field mustard	mitochondrion	51.89	56.75
Bra005755.1-P	Field mustard	cytosol	50.88	56.58
Bra036972.1-P	Field mustard	mitochondrion	49.62	52.67
Bra028720.1-P	Field mustard	mitochondrion	50.88	52.6
Bra034592.1-P	Field mustard	mitochondrion	50.38	51.95
Bra036813.1-P	Field mustard	vacuole	65.24	51.9
Zm00001d036395_P008	Maize	mitochondrion	66.25	49.44
Bra009224.1-P	Field mustard	cytosol, mitochondrion	42.82	49.28
Bra022166.1-P	Field mustard	cytosol	20.4	34.76
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.65	29.1
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	27.71	19.0
Bra029766.1-P	Field mustard	nucleus	27.71	17.08
Bra001308.1-P	Field mustard	nucleus	28.46	16.52
Bra041012.1-P	Field mustard	nucleus	28.21	16.52
Bra009593.1-P	Field mustard	nucleus	28.97	14.3
Bra017322.1-P	Field mustard	nucleus	26.45	14.23
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	29.97	14.0
Bra005350.1-P	Field mustard	mitochondrion, plastid	25.69	13.69

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra033566	EnsemblPlants:Bra033566.1
EnsemblPlants:Bra033566.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4EXM9
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF342	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000253F951
SEG:seg	:	:	:	:	:

Description

AT4G38520 (E=6e-176) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA06:+:26202420..26203939

Molecular Weight (calculated)

43771.1 Da

IEP (calculated)

7.950

GRAVY (calculated)

-0.200

Length

397 amino acids

Sequence
(BLAST)

001: MLSALMNFLN ACLWPTRSDH HHHQDGDGGR QDGLLWYRDS GHHVFGDFSM AVVQANNLLE DQSQLESGSL SSSSSSAPPY GTFLGVYDGH GGPETSRFIN
101: HHLFLHLKRF AAEQECMSAD VIKKAFQATE EGFLSLVSNR FQTAPQLATV GSCCLVCVIS DGTLYVANAG DSRAVLGQLF KSTAAAGDVH ATQLSAEHNA
201: SIESVRRELQ ALHPDHPDIV LLKHNVWRVK GIIQVSRSIG DVYLKRSEFN REPLYAKFRL RAPFSRPLLS AEPSITVHTL QPHDLFIICA SDGLWEHMSN
301: QEAVEIVHTH PRNGIAKRLV KMALKEAAKK REMRYSDLKK IDRGVRRHFH DDITVIVVFF DTSLVVSRAR GPAVSVRGAG VNLPHNSLAP CTTAGAS

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.