CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

nucleus 2
plastid 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	93.98	93.98
Zm00001d027571_P003	Maize	cytosol	93.48	93.48
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	82.96	92.72
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	92.23	88.25
Os03t0137200-01	Rice	mitochondrion	85.96	85.96
TraesCS4B01G335500.1	Wheat	mitochondrion	84.46	84.25
TraesCS4D01G331100.1	Wheat	mitochondrion	84.21	84.21
TraesCS5A01G505300.1	Wheat	mitochondrion	83.96	83.96
HORVU4Hr1G080570.1	Barley	mitochondrion	83.71	83.71
EER94559	Sorghum	cytosol	77.94	79.13
Solyc10g055650.1.1	Tomato	cytosol	63.41	74.63
CDY16313	Canola	extracellular	69.92	74.01
Bra038895.1-P	Field mustard	plastid	69.92	73.04
CDY33283	Canola	plastid	69.92	73.04
PGSC0003DMT400068706	Potato	mitochondrion	69.67	72.58
PGSC0003DMT400009248	Potato	mitochondrion	70.43	72.05
Solyc03g033340.2.1	Tomato	mitochondrion	71.68	72.04
PGSC0003DMT400058098	Potato	mitochondrion	71.43	71.79
PGSC0003DMT400046486	Potato	mitochondrion	69.42	71.39
CDX73725	Canola	vacuole	67.42	71.35
Solyc02g083420.2.1	Tomato	mitochondrion	69.67	71.28
AT3G51370.1	Thale cress	cytosol, extracellular	67.42	70.98
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	68.92	70.88
VIT_03s0038g02650.t01	Wine grape	mitochondrion	70.43	70.78
KRH07984	Soybean	mitochondrion	69.42	70.3
KRH36089	Soybean	cytosol	69.92	70.28
KRH69725	Soybean	mitochondrion	68.92	69.8
KRG90665	Soybean	mitochondrion	69.42	69.77
EER90402	Sorghum	mitochondrion	67.92	69.67
AT5G66080.1	Thale cress	plastid	67.17	69.61
Bra010741.1-P	Field mustard	plastid	63.91	67.11
CDX90277	Canola	cytosol, mitochondrion, nucleus	63.91	67.11
CDY12086	Canola	cytosol, mitochondrion, nucleus	63.66	66.84
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	65.66	66.0
AT4G38520.1	Thale cress	mitochondrion	65.66	65.5
VIT_00s0434g00020.t01	Wine grape	cytosol	65.91	64.46
CDY54807	Canola	nucleus, peroxisome, plastid	62.91	64.36
CDY70696	Canola	extracellular, peroxisome	50.63	62.35
CDY29015	Canola	cytosol	49.87	55.28
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	52.63	54.97
CDX78002	Canola	vacuole	66.42	53.11
Bra036813.1-P	Field mustard	vacuole	66.42	53.11
KXG30997	Sorghum	mitochondrion	51.13	52.58
KXG26992	Sorghum	cytosol, mitochondrion	50.38	51.15
KXG37497	Sorghum	mitochondrion	46.12	48.81
EER95306	Sorghum	mitochondrion	45.86	46.68
EES12087	Sorghum	cytosol	25.56	19.58
OQU92823	Sorghum	plastid	25.31	18.81
EES17579	Sorghum	mitochondrion, peroxisome, plastid	27.57	18.77
EES07427	Sorghum	plastid	28.07	18.7
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	28.07	18.15
EER90623	Sorghum	plastid	28.82	18.14
OQU92535	Sorghum	nucleus	30.08	13.38

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EntrezGene:8057403	UniProt:C5WYZ4
EnsemblPlants:EER95550	ProteinID:EER95550	ProteinID:EER95550.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF324	SMART:SM00332	EnsemblPlantsGene:SORBI_3001G512600
SUPFAM:SSF81606	unigene:Sbi.6810	UniParc:UPI0001A83147	RefSeq:XP_002468552.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:78023368..78027507

Molecular Weight (calculated)

44028.4 Da

IEP (calculated)

8.589

GRAVY (calculated)

-0.326

Length

399 amino acids

Sequence
(BLAST)

001: MLAAVMDYFS SCWGPRSRAG HRGKGSDAAG RQDGLLWYKD AGQLVTGEFS MAVVQANQLL EDQSQVESGP LSLADPGPQG TFVGVHDGHG GPETARFIND
101: HLFNHLRKFA TEHKCVSADV IRKAFQATEE GWLSLVSKEW SMKPQIASVG SCCLVGVICA GTLYVANLGD SRAVLGRLVK ATGEAVAMQL SSEHNACHEE
201: VRQELQSSHP DDPHIVVLKH NVWRVKGLIQ ISRSIGDVYL KKPEYNREPL HSKFRLRETF QRPILSADPQ ITEHRIQPND QFVIFASDGL WEHLSTQEAV
301: DLVHSSPRNG IARRLVKAAM QEAAKKREMR YSDLKKIDRG VRRHFHDDTT VVVLFLDSNA MSKASWSKSP SVSIRGGGVT LPAKSLAPFS ALAQLNSTY

Best Arabidopsis Sequence Match ( AT3G51370.3 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.