CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014797_P001	Maize	mitochondrion	97.43	96.19
Os06t0717800-01	Rice	mitochondrion	92.8	92.09
TraesCS7A01G537000.1	Wheat	mitochondrion	91.0	90.31
HORVU7Hr1G117970.1	Barley	mitochondrion	90.49	89.8
TraesCS7B01G455500.1	Wheat	mitochondrion	90.23	89.54
TraesCS7D01G524700.1	Wheat	mitochondrion	89.97	89.29
GSMUA_Achr3P00610_001	Banana	cytosol	73.26	81.9
GSMUA_Achr4P04870_001	Banana	cytosol	71.21	80.99
GSMUA_Achr3P26820_001	Banana	mitochondrion	78.92	77.92
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	79.18	77.58
Solyc03g033340.2.1	Tomato	mitochondrion	78.15	76.57
PGSC0003DMT400058098	Potato	mitochondrion	77.64	76.07
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	75.84	76.03
PGSC0003DMT400046486	Potato	mitochondrion	75.84	76.03
KRH69725	Soybean	mitochondrion	76.61	75.63
KRH07984	Soybean	mitochondrion	76.61	75.63
KRH36089	Soybean	cytosol	77.12	75.57
PGSC0003DMT400009248	Potato	mitochondrion	75.58	75.38
KRG90665	Soybean	mitochondrion	76.86	75.31
CDY16313	Canola	extracellular	72.75	75.07
Solyc02g083420.2.1	Tomato	mitochondrion	74.81	74.62
VIT_03s0038g02650.t01	Wine grape	mitochondrion	76.09	74.56
PGSC0003DMT400068706	Potato	mitochondrion	73.26	74.41
AT3G51370.1	Thale cress	cytosol, extracellular	72.49	74.41
Bra038895.1-P	Field mustard	plastid	72.75	74.08
CDY33283	Canola	plastid	72.75	74.08
CDX73725	Canola	vacuole	71.72	74.01
Solyc10g055650.1.1	Tomato	cytosol	64.27	73.75
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	71.21	72.32
AT5G66080.1	Thale cress	plastid	70.95	71.69
Zm00001d036395_P008	Maize	mitochondrion	95.89	70.11
EER94559	Sorghum	cytosol	70.69	69.97
GSMUA_Achr9P24110_001	Banana	cytosol	70.69	68.75
AT4G38520.1	Thale cress	mitochondrion	70.18	68.25
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	69.41	68.01
EER95550	Sorghum	mitochondrion, peroxisome, plastid	69.67	67.92
CDX90277	Canola	cytosol, mitochondrion, nucleus	66.32	67.89
CDY12086	Canola	cytosol, mitochondrion, nucleus	66.32	67.89
Bra010741.1-P	Field mustard	plastid	65.81	67.37
VIT_00s0434g00020.t01	Wine grape	cytosol	69.92	66.67
CDY54807	Canola	nucleus, peroxisome, plastid	65.81	65.64
CDY70696	Canola	extracellular, peroxisome	53.47	64.2
CDY29015	Canola	cytosol	53.47	57.78
CDX78002	Canola	vacuole	71.98	56.11
Bra036813.1-P	Field mustard	vacuole	71.98	56.11
KXG30997	Sorghum	mitochondrion	52.7	52.84
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	51.16	52.09
KXG26992	Sorghum	cytosol, mitochondrion	52.19	51.65
KXG37497	Sorghum	mitochondrion	46.27	47.75
EER95306	Sorghum	mitochondrion	44.99	44.64
OQU92823	Sorghum	plastid	29.05	21.04
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	32.13	20.26
EES12087	Sorghum	cytosol	25.96	19.39
EES07427	Sorghum	plastid	29.82	19.37
EES17579	Sorghum	mitochondrion, peroxisome, plastid	28.79	19.11
EER90623	Sorghum	plastid	30.59	18.77
OQU92535	Sorghum	nucleus	29.31	12.71

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EntrezGene:8065001	UniProt:C5Z1X2
EnsemblPlants:EER90402	ProteinID:EER90402	ProteinID:EER90402.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932
InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF409	SMART:SM00332	EnsemblPlantsGene:SORBI_3010G268300
SUPFAM:SSF81606	unigene:Sbi.3851	UniParc:UPI0001A89878	RefSeq:XP_002439035.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:60294432..60299347

Molecular Weight (calculated)

43126.7 Da

IEP (calculated)

8.631

GRAVY (calculated)

-0.235

Length

389 amino acids

Sequence
(BLAST)

001: MLVTLMNLLR ACWRPSNRHA RTGSDVTGRQ DGLLWYKDAG QHVNGEFSMA VVQANNLLED QCQIESGPLS FLDSGPYGTF VGVYDGHGGP ETACYINEHL
101: FQNLKRFASE QNAMSADVLK KAYEATEDGF FSVVTKQWPI KPQIAAVGSC CLVGVICGGV LYVANVGDSR AVLGRHVKAT GEVLAVQLSA EHNVSIESVR
201: KELQSMHPED RHIVVLKHNV WRVKGLIQVC RSIGDAYLKK QEFNREPLYA KFRLREPFNK PILSSEPSIC VQPLQPHDQF LIFASDGLWE HLTNQEAVDI
301: VHSSPRSGCA RRLIRAALQE AAKKREMRYS DLKKIDRGVR RHFHDDITVI VVFLDSSLVS RASTHRGPTL SLRGGGASAG LRSNTLAPT

Best Arabidopsis Sequence Match ( AT3G51370.3 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.