Factsheet for GSMUA_Achr4P04870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P00610_001	Banana	cytosol	86.55	85.06
GSMUA_Achr3P26820_001	Banana	mitochondrion	88.6	76.9
GSMUA_Achr9P24110_001	Banana	cytosol	88.3	75.5
Solyc10g055650.1.1	Tomato	cytosol	74.56	75.22
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	83.63	74.67
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	82.75	71.28
EER90402	Sorghum	mitochondrion	80.99	71.21
Os06t0717800-01	Rice	mitochondrion	81.29	70.92
KRH69725	Soybean	mitochondrion	81.29	70.56
Zm00001d014797_P001	Maize	mitochondrion	81.29	70.56
KRH07984	Soybean	mitochondrion	80.99	70.3
GSMUA_Achr6P23480_001	Banana	cytosol	68.42	70.06
KRH36089	Soybean	cytosol	81.29	70.03
GSMUA_Achr8P13120_001	Banana	cytosol	80.12	69.9
CDX73725	Canola	vacuole	76.9	69.76
CDY16313	Canola	extracellular	76.9	69.76
PGSC0003DMT400009248	Potato	mitochondrion	79.53	69.74
KRG90665	Soybean	mitochondrion	80.7	69.52
Bra038895.1-P	Field mustard	plastid	77.19	69.11
CDY33283	Canola	plastid	77.19	69.11
VIT_03s0038g02650.t01	Wine grape	mitochondrion	80.12	69.02
Solyc02g083420.2.1	Tomato	mitochondrion	78.66	68.97
GSMUA_Achr5P11520_001	Banana	mitochondrion	79.82	68.94
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	78.07	68.81
PGSC0003DMT400046486	Potato	mitochondrion	78.07	68.81
HORVU7Hr1G117970.1	Barley	mitochondrion	78.66	68.62
AT3G51370.1	Thale cress	cytosol, extracellular	76.02	68.6
PGSC0003DMT400058098	Potato	mitochondrion	79.53	68.51
Solyc03g033340.2.1	Tomato	mitochondrion	79.53	68.51
TraesCS7B01G455500.1	Wheat	mitochondrion	78.36	68.37
TraesCS7A01G537000.1	Wheat	mitochondrion	78.07	68.11
AT5G66080.1	Thale cress	plastid	76.32	67.79
TraesCS7D01G524700.1	Wheat	mitochondrion	77.49	67.6
PGSC0003DMT400068706	Potato	mitochondrion	74.85	66.84
GSMUA_Achr10P...	Banana	cytosol	72.81	66.22
GSMUA_Achr6P15470_001	Banana	mitochondrion	71.93	64.91
VIT_00s0434g00020.t01	Wine grape	cytosol	76.32	63.97
CDY70696	Canola	extracellular, peroxisome	60.23	63.58
AT4G38520.1	Thale cress	mitochondrion	73.68	63.0
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	72.81	62.72
CDY12086	Canola	cytosol, mitochondrion, nucleus	69.59	62.63
CDX90277	Canola	cytosol, mitochondrion, nucleus	69.3	62.37
Bra010741.1-P	Field mustard	plastid	68.71	61.84
CDY54807	Canola	nucleus, peroxisome, plastid	68.42	60.0
CDY29015	Canola	cytosol	57.31	54.44
CDX78002	Canola	vacuole	77.49	53.11
Bra036813.1-P	Field mustard	vacuole	77.49	53.11
GSMUA_Achr11P...	Banana	mitochondrion	57.89	52.38
GSMUA_Achr6P11170_001	Banana	cytosol	57.31	52.13
Zm00001d036395_P008	Maize	mitochondrion	80.12	51.5
GSMUA_Achr2P02070_001	Banana	mitochondrion	55.56	51.08
GSMUA_Achr8P13470_001	Banana	mitochondrion	55.26	49.48
GSMUA_Achr4P14220_001	Banana	mitochondrion	52.34	47.99
GSMUA_Achr2P21550_001	Banana	mitochondrion	53.22	47.15
GSMUA_Achr3P02220_001	Banana	mitochondrion	50.58	46.01
GSMUA_Achr10P...	Banana	cytosol	27.78	26.76
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	28.66	20.55
GSMUA_Achr5P29080_001	Banana	mitochondrion	33.04	19.58
GSMUA_Achr2P16350_001	Banana	mitochondrion	31.29	19.21
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	34.21	18.6
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	30.41	18.12
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	31.58	17.73
GSMUA_Achr5P13850_001	Banana	nucleus	30.7	17.27
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	28.95	16.98
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	33.92	15.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr4G04870_001	EnsemblPlants:GSMUA_Achr4P04870_001	EnsemblPlants:GSMUA_Achr4T04870_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0SL54
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF237	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000296C513

Description

Probable protein phosphatase 2C 60 [Source:GMGC_GENE;Acc:GSMUA_Achr4G04870_001]

Coordinates

chr4:+:3811935..3820918

Molecular Weight (calculated)

38116.8 Da

IEP (calculated)

9.321

GRAVY (calculated)

-0.232

Length

342 amino acids

Sequence
(BLAST)

001: MAVVQANNLL EDQSQIESGP LSSLEFGPYG TFVGVYDGHG GPETSRYVNE HLFQHLKRFA SEQQSMSADV IRKAYQATEE GFISLVTKQW PVKPQIASVG
101: SCCLVGVICG DMLYIANLGD SRVVLGRLVK ATREVLAVQL SAEHNVGIES VRKELQSIHP DDRQIVLLKH NVWRVKGLIQ VCRSIGDVYL KKAEFNREPL
201: HVKFRLREPF KKPILSSEPS ITVHSLQPQD QFLIFASDGL WEHLSNQEAV DIVQNNPRSG SARRLVKIAL QEAAKKREMR YSDLTKIGRG VRRHFHDDIT
301: VIVVFLDNNL ISRASSLRGP TLSVRGGGIN APSNSLTPYT TP

Best Arabidopsis Sequence Match ( AT3G51370.3 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.