Factsheet for GSMUA_Achr10P03630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P29080_001	Banana	mitochondrion	70.44	74.35
CDY40354	Canola	cytosol	28.57	72.2
GSMUA_Achr2P16350_001	Banana	mitochondrion	63.88	69.84
CDY71703	Canola	cytosol	19.54	59.5
EER90623	Sorghum	plastid	61.25	58.83
Zm00001d012962_P001	Maize	mitochondrion	60.92	58.7
Zm00001d034655_P001	Maize	peroxisome	59.11	58.54
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	61.41	58.53
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	59.77	58.05
TraesCS5A01G479600.1	Wheat	plastid	60.26	57.43
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	60.1	57.37
HORVU5Hr1G113240.1	Barley	plastid	60.1	57.19
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	52.55	55.75
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	52.05	54.37
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	53.2	54.0
Solyc10g086490.1.1	Tomato	cytosol	52.38	53.52
Solyc09g010780.2.1	Tomato	cytosol	54.19	52.97
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	53.53	51.66
CDY44706	Canola	nucleus	49.1	50.51
CDY62569	Canola	nucleus	50.9	50.49
CDY41610	Canola	nucleus	48.77	50.0
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	51.72	48.46
AT5G02400.1	Thale cress	nucleus	52.87	47.77
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	45.48	46.4
Bra029766.1-P	Field mustard	nucleus	48.93	46.27
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	44.66	45.18
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	46.47	44.99
CDY07928	Canola	nucleus	48.6	44.71
GSMUA_Achr5P13850_001	Banana	nucleus	44.5	44.57
CDX73980	Canola	nucleus	48.6	44.44
Bra001308.1-P	Field mustard	nucleus	48.93	43.57
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	22.33	40.0
Bra009593.1-P	Field mustard	nucleus	52.71	39.93
GSMUA_Achr10P...	Banana	cytosol	22.82	39.15
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	47.13	38.58
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	26.44	33.75
GSMUA_Achr6P23480_001	Banana	cytosol	17.9	32.63
GSMUA_Achr4P04870_001	Banana	cytosol	17.73	31.58
GSMUA_Achr3P00610_001	Banana	cytosol	17.57	30.75
GSMUA_Achr6P15470_001	Banana	mitochondrion	18.88	30.34
GSMUA_Achr10P...	Banana	cytosol	18.55	30.05
GSMUA_Achr3P02220_001	Banana	mitochondrion	18.06	29.26
GSMUA_Achr11P...	Banana	mitochondrion	18.06	29.1
GSMUA_Achr3P26820_001	Banana	mitochondrion	18.72	28.93
GSMUA_Achr2P02070_001	Banana	mitochondrion	17.41	28.49
GSMUA_Achr6P11170_001	Banana	cytosol	17.57	28.46
GSMUA_Achr8P13470_001	Banana	mitochondrion	17.73	28.27
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	18.39	28.21
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	17.73	28.2
GSMUA_Achr5P11520_001	Banana	mitochondrion	18.23	28.03
GSMUA_Achr2P21550_001	Banana	mitochondrion	17.57	27.72
GSMUA_Achr8P13120_001	Banana	cytosol	17.73	27.55
GSMUA_Achr9P24110_001	Banana	cytosol	17.41	26.5
GSMUA_Achr4P14220_001	Banana	mitochondrion	15.76	25.74

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G03630_001	EnsemblPlants:GSMUA_Achr10P03630_001	EnsemblPlants:GSMUA_Achr10T03630_001	InterPro:IPR001932	InterPro:IPR036457
UniProt:M0RF40	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295525C	SEG:seg

Description

Probable protein phosphatase 2C 4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G03630_001]

Coordinates

chr10:+:11886744..11890427

Molecular Weight (calculated)

66369.9 Da

IEP (calculated)

5.938

GRAVY (calculated)

-0.311

Length

609 amino acids

Sequence
(BLAST)

001: MGNGLAGLAH CYSGGGRRHG SAAVSWDPCD EGLGHSFCYL RPDAACGVSG RPSATAVAKV HNLEETTTFR SISGAAVSAN ASTPLSTSLL DFAGPTAASA
101: FESSTSFSSV ALQPVPRFSG PLSGPLAAAD RGFMSGPIER GFMSGPIENQ SALFSAPFEK APFFSDQLRR SLSRRLPKSG RAAARSIFRG LTKAIARTMS
201: TTAYGHGSIV APATQWSDSL DSLSGNIHWA QGKAGEDRVQ VVVSEDHGWV FVGIYDGFNG PDATDYLLSN LYSAVQRELK GLLWDDKDDT FCHEAFDDSL
301: RGAAKKLKEQ LSRASPDHAV NHSQVLKALS RSLRNTEDSF LDIADKIGSE NPELALMGSC VLVMLMKGED VYLMSVGDSR AILARKEERD LWTSIGKARQ
401: DLERINEETL FDLEGLSDGH PSNELSNLSA LQLTSDHSTS IEEEVRRIRN EHPDDASAIS NDRVKGSLKV TRAFGAGFLK QPKWNNALLE MFRIDYVGTS
501: PYITCNPSLY HHKLGPKDRF LILSSDGLYQ YFTNEEAVAQ VEMFIAATPE GDPAQHLAEE VLIRAAKRAG MDFHDLLEIP QGDRRRYHDD ISIIIISLEG
601: RIWRSCTQT

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.