Factsheet for GSMUA_Achr2P16350_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40354	Canola	cytosol	30.34	70.12
GSMUA_Achr5P29080_001	Banana	mitochondrion	70.2	67.76
GSMUA_Achr10P...	Banana	mitochondrion, nucleus, plastid	69.84	63.88
EER90623	Sorghum	plastid	64.99	57.1
Zm00001d012962_P001	Maize	mitochondrion	64.63	56.96
Zm00001d034655_P001	Maize	peroxisome	62.84	56.91
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	63.73	56.62
Os03t0821300-01	Rice	mitochondrion, nucleus, peroxisome, plastid	64.81	56.49
TraesCS5A01G479600.1	Wheat	plastid	64.27	56.02
CDY71703	Canola	cytosol	20.11	56.0
TraesCS5D01G493200.1	Wheat	mitochondrion, plastid	64.09	55.96
HORVU5Hr1G113240.1	Barley	plastid	64.09	55.78
GSMUA_Achr9P03940_001	Banana	cytosol, nucleus, peroxisome	56.19	54.53
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus, peroxisome	55.66	53.17
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	57.09	53.0
Solyc10g086490.1.1	Tomato	cytosol	56.55	52.85
Solyc09g010780.2.1	Tomato	cytosol	57.45	51.36
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	57.09	50.4
CDY62569	Canola	nucleus	54.22	49.19
CDY44706	Canola	nucleus	51.53	48.48
CDY41610	Canola	nucleus	51.17	47.98
AT3G09400.1	Thale cress	cytosol, peroxisome, plastid	54.94	47.08
AT5G02400.1	Thale cress	nucleus	55.48	45.85
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	48.29	45.06
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	50.45	44.67
Bra029766.1-P	Field mustard	nucleus	51.53	44.57
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	47.76	44.19
GSMUA_Achr5P13850_001	Banana	nucleus	48.11	44.08
CDY07928	Canola	nucleus	52.06	43.81
CDX73980	Canola	nucleus	51.53	43.09
Bra001308.1-P	Field mustard	nucleus	51.71	42.11
GSMUA_Achr10P...	Banana	cytosol	24.42	38.31
Bra009593.1-P	Field mustard	nucleus	55.12	38.18
GSMUA_Achr8P18740_001	Banana	cytosol, nucleus, peroxisome	50.81	38.04
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	22.44	36.76
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	28.73	33.54
GSMUA_Achr6P23480_001	Banana	cytosol	20.11	33.53
GSMUA_Achr6P15470_001	Banana	mitochondrion	21.54	31.66
GSMUA_Achr4P04870_001	Banana	cytosol	19.21	31.29
GSMUA_Achr10P...	Banana	cytosol	21.01	31.12
GSMUA_Achr3P00610_001	Banana	cytosol	18.67	29.89
GSMUA_Achr11P...	Banana	mitochondrion	19.21	28.31
GSMUA_Achr8P13470_001	Banana	mitochondrion	19.39	28.27
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	19.21	27.94
GSMUA_Achr3P26820_001	Banana	mitochondrion	19.75	27.92
GSMUA_Achr6P11170_001	Banana	cytosol	18.67	27.66
GSMUA_Achr8P13120_001	Banana	cytosol	19.39	27.55
GSMUA_Achr5P11520_001	Banana	mitochondrion	19.57	27.53
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	19.39	27.2
GSMUA_Achr2P02070_001	Banana	mitochondrion	18.13	27.15
GSMUA_Achr3P02220_001	Banana	mitochondrion	18.31	27.13
GSMUA_Achr2P21550_001	Banana	mitochondrion	18.49	26.68
GSMUA_Achr9P24110_001	Banana	cytosol	19.03	26.5
GSMUA_Achr4P14220_001	Banana	mitochondrion	17.41	26.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr2G16350_001	EnsemblPlants:GSMUA_Achr2P16350_001	EnsemblPlants:GSMUA_Achr2T16350_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0S8H6	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294855B
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G16350_001]

Coordinates

chr2:-:17263063..17266756

Molecular Weight (calculated)

61126.3 Da

IEP (calculated)

5.651

GRAVY (calculated)

-0.247

Length

557 amino acids

Sequence
(BLAST)

001: MGNGYARLTR CFCCGGFPRH RGRHVAAAVT SEFYDEGLGH SFCYVHHSEE TTTFRAISGA SVSANPSTPL STVPHLVDCA GEGAVPTSAA FESSTSFSSV
101: ALQPVPRFSG PLSGPIAAGA DRGFMSGPIE RGFMSGPLDH RAALFSGPLE KPPSLTGQLL PITRTIYATA PGRGSTKGGK WSDSSDSRNG TLQWAQGKAG
201: EDRIHVVVSE EHGWVFVGIY DGFNGPDATD YLLSNLYFAV HQELKGLLWH DKEDSLSGPI HDPLARLCSS GEVNHSQVLK ALSQALRKTE ENYLDIADKM
301: ISENPELALM GSCVLVMLLK GDDVYLMNVG DSRAILAQKA ESDSWSSIRK PKLDLHKINE EIVSDIEVFD GLKCFPNLEA TQLTLDHSTS VEEEVCRIKS
401: EHPDDSLAIS NNRVKGSLKV TRAFGAGFLK QPKWNNALLE MFRIDYIGTS PYLTCNPFLY HHKLGPKDKF LILSSDGLYQ YFTNEEAVAQ IEMFIETTPE
501: GDPAQHLVEE VIFRAAKKAG MDFHELLEIP QGDRRQYHDD VSIIVISLEG QIWRSCL

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.