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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX73725 Canola vacuole 70.0 66.84
CDY16313 Canola extracellular 70.0 66.84
CDY33283 Canola plastid 70.28 66.23
AT3G51370.1 Thale cress cytosol, extracellular 68.61 65.17
Solyc10g055650.1.1 Tomato cytosol 55.0 58.41
GSMUA_Achr4P04870_001 Banana cytosol 54.44 57.31
PGSC0003DMT400068706 Potato mitochondrion 60.83 57.18
KRH69725 Soybean mitochondrion 61.67 56.35
PGSC0003DMT400046486 Potato mitochondrion 60.56 56.19
Solyc01g111730.2.1 Tomato cytosol, mitochondrion, plastid 60.56 56.19
KRH07984 Soybean mitochondrion 61.39 56.09
GSMUA_Achr3P00610_001 Banana cytosol 53.61 55.46
PGSC0003DMT400058098 Potato mitochondrion 60.83 55.16
Solyc03g033340.2.1 Tomato mitochondrion 60.56 54.91
KRH36089 Soybean cytosol 60.0 54.41
PGSC0003DMT400009248 Potato mitochondrion 58.89 54.36
Solyc02g083420.2.1 Tomato mitochondrion 58.89 54.36
Os06t0717800-01 Rice mitochondrion 59.17 54.34
GSMUA_Achr3P26820_001 Banana mitochondrion 59.17 54.06
KRG90665 Soybean mitochondrion 59.44 53.9
Zm00001d027570_P001 Maize cytosol, peroxisome, plastid 53.33 53.78
EER90402 Sorghum mitochondrion 57.78 53.47
CDY12086 Canola cytosol, mitochondrion, nucleus 56.11 53.16
VIT_03s0038g02650.t01 Wine grape mitochondrion 58.61 53.15
GSMUA_Achr8P13120_001 Banana cytosol 57.78 53.06
Zm00001d014797_P001 Maize mitochondrion 57.78 52.79
GSMUA_Achr5P11520_001 Banana mitochondrion 58.06 52.78
GSMUA_Achr1P26350_001 Banana mitochondrion, peroxisome, plastid 58.06 52.64
HORVU7Hr1G117970.1 Barley mitochondrion 57.22 52.55
CDX90277 Canola cytosol, mitochondrion, nucleus 55.28 52.37
TraesCS7A01G537000.1 Wheat mitochondrion 56.94 52.3
TraesCS7B01G455500.1 Wheat mitochondrion 56.94 52.3
Os03t0137200-01 Rice mitochondrion 57.5 51.88
Zm00001d027572_P004 Maize cytosol, peroxisome, plastid 57.5 51.88
TraesCS7D01G524700.1 Wheat mitochondrion 56.39 51.79
Zm00001d027571_P003 Maize cytosol 56.39 50.88
HORVU4Hr1G080570.1 Barley mitochondrion 56.11 50.63
CDX78002 Canola vacuole 70.0 50.5
EER94559 Sorghum cytosol 55.0 50.38
Os10t0544900-01 Rice plastid 54.72 50.13
TraesCS4D01G331100.1 Wheat mitochondrion 55.56 50.13
CDY54807 Canola nucleus, peroxisome, plastid 54.17 50.0
EER95550 Sorghum mitochondrion, peroxisome, plastid 55.28 49.87
TraesCS5A01G505300.1 Wheat mitochondrion 55.28 49.87
Zm00001d048359_P004 Maize mitochondrion, peroxisome, plastid 57.5 49.64
VIT_00s0434g00020.t01 Wine grape cytosol 56.11 49.51
TraesCS4B01G335500.1 Wheat mitochondrion 55.0 49.5
CDY42159 Canola cytosol 51.94 49.34
GSMUA_Achr9P24110_001 Banana cytosol 54.72 49.25
TraesCS1A01G205300.2 Wheat cytosol, peroxisome, plastid 53.61 49.23
TraesCS1D01G208600.1 Wheat cytosol, peroxisome, plastid 53.61 49.23
Zm00001d047385_P004 Maize cytosol, mitochondrion, plastid 54.17 48.99
TraesCS1B01G218900.1 Wheat cytosol, peroxisome, plastid 53.33 48.98
GSMUA_Achr7P03910_001 Banana cytosol, nucleus, peroxisome 51.94 48.83
HORVU1Hr1G052770.6 Barley nucleus, peroxisome, plastid 53.89 48.62
CDY50535 Canola cytosol, mitochondrion, plastid 51.94 48.32
CDY52665 Canola cytosol 50.83 48.28
CDY08420 Canola cytosol, mitochondrion, plastid 50.56 48.02
CDX76124 Canola mitochondrion 49.44 47.59
CDX73413 Canola mitochondrion 50.56 47.03
CDY55405 Canola cytosol, nucleus, plastid 48.06 46.88
CDY40818 Canola mitochondrion 16.39 46.83
CDY51441 Canola mitochondrion 50.28 46.77
CDY04862 Canola cytosol, mitochondrion, plastid 46.67 46.67
CDY70696 Canola extracellular, peroxisome 41.94 46.6
CDY10428 Canola mitochondrion 46.67 46.28
CDY02904 Canola mitochondrion 48.06 46.26
CDY11224 Canola cytosol 45.56 45.94
CDX70348 Canola cytosol, mitochondrion 45.83 45.45
CDX75902 Canola plastid 45.28 43.24
CDX80837 Canola cytosol, mitochondrion 43.61 43.13
CDY34992 Canola cytosol, plastid, vacuole 43.61 41.53
CDY39026 Canola cytosol, plastid, vacuole 43.61 41.53
CDY14069 Canola cytosol, mitochondrion 43.33 39.9
CDY49385 Canola mitochondrion 41.39 39.84
CDY05001 Canola cytosol, mitochondrion 42.78 39.39
Zm00001d036395_P008 Maize mitochondrion 57.78 39.1
CDX72438 Canola mitochondrion 40.56 39.04
CDY51276 Canola mitochondrion 8.89 38.55
CDX98953 Canola cytosol, mitochondrion 40.83 38.38
CDY28332 Canola mitochondrion 40.83 38.28
CDY51944 Canola mitochondrion 40.83 38.18
CDX70071 Canola cytosol, mitochondrion 40.56 38.12
CDY40354 Canola cytosol 15.28 22.82
CDY71703 Canola cytosol 10.0 18.0
CDY43107 Canola cytosol, nucleus, peroxisome 21.11 15.51
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 25.0 15.49
CDY57256 Canola cytosol, nucleus, peroxisome 25.0 15.41
CDX92079 Canola cytosol, nucleus, peroxisome 20.83 15.12
CDY71973 Canola cytosol, nucleus, peroxisome 22.22 15.07
CDY06718 Canola mitochondrion, plastid 26.11 14.9
CDX95140 Canola cytosol, mitochondrion, nucleus 25.56 14.84
CDY71801 Canola cytosol 21.94 14.5
CDY44706 Canola nucleus 23.61 14.36
CDY41610 Canola nucleus 23.61 14.31
CDY62569 Canola nucleus 24.17 14.17
CDY68192 Canola mitochondrion, nucleus, plastid 22.22 14.16
CDY59038 Canola plastid 22.5 14.14
CDY07928 Canola nucleus 24.44 13.29
CDX73980 Canola nucleus 24.44 13.21
CDY31682 Canola nucleus, plastid 23.89 12.93
CDX84217 Canola nucleus, plastid 23.33 12.67
CDX80059 Canola cytosol, nucleus, peroxisome 27.5 11.65
CDY41568 Canola cytosol, nucleus, peroxisome 27.5 11.63
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:A0A078GR92UniProt:A0A078GR92
EnsemblPlants:CDY29015ProteinID:CDY29015ProteinID:CDY29015.1ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0004722GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0043169GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00041747001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2CInterPro:PP2C_BS
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF237
SMART:SM00332SUPFAM:SSF81606UniParc:UPI0004EED5FASEG:seg::
Description
BnaC07g32210DBnaC07g32210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR92]
Coordinates
chrLK032229:+:190410..193784
Molecular Weight (calculated)
40146.9 Da
IEP (calculated)
7.082
GRAVY (calculated)
-0.372
Length
360 amino acids
Sequence
(BLAST)
001: MSCFFQTTGP SHASVRPSEG KREKEVEVDS HTLLLIDSKS ASDLLLLTSA SAPISGKQDG LLWYKDSGHH LLGEFSMAVV QANNLLEDQS QVETLDSGPY
101: GTFIGIYDGH GGPETSRFVN DHLFHHLKTE EGSMSMDVIR KAYEATEEGF LAVVTKQWPP TLETTSEVIA LQLSAEHNVS TESIQQEMRS LHPDDSRIVV
201: LKHIAEFNRK PLYAKYRLCE PMKRPILSGE PSITEHVIQP QDRFLILASD GLWEQMRNQE AVDIVQNHPR NGIARRLVKM ALQAAAKKRE MRYSDLKKIQ
301: RGVRRHFHDD ITVVVIFLDT DVVSSARGPS LSIRGGGNKG SLPSFSTCFG TKLKLKSAQI
Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)
001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI
Arabidopsis Description
Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.