CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	97.93	98.27
CDY57256	Canola	cytosol, nucleus, peroxisome	92.43	91.95
CDX95140	Canola	cytosol, mitochondrion, nucleus	83.13	77.9
CDY06718	Canola	mitochondrion, plastid	82.96	76.39
AT1G07630.1	Thale cress	cytosol, nucleus, peroxisome	83.99	73.72
CDY71973	Canola	cytosol, nucleus, peroxisome	67.3	73.63
CDY71801	Canola	cytosol	68.85	73.39
CDY40354	Canola	cytosol	28.06	67.63
KRH29800	Soybean	cytosol, nucleus, plastid	70.05	56.53
KRH24796	Soybean	nucleus	70.05	56.53
VIT_06s0004g04600.t01	Wine grape	nucleus	70.22	56.35
Solyc06g076100.2.1	Tomato	nucleus	68.33	56.07
PGSC0003DMT400078173	Potato	nucleus	68.67	56.04
CDY71703	Canola	cytosol	18.93	55.0
CDY62569	Canola	nucleus	52.84	50.0
CDY44706	Canola	nucleus	49.4	48.48
CDY41610	Canola	nucleus	49.23	48.15
CDX73980	Canola	nucleus	50.09	43.69
CDY07928	Canola	nucleus	49.74	43.66
CDY68192	Canola	mitochondrion, nucleus, plastid	40.28	41.42
CDY59038	Canola	plastid	38.73	39.27
CDY31682	Canola	nucleus, plastid	44.92	39.25
CDX84217	Canola	nucleus, plastid	44.75	39.22
CDY41568	Canola	cytosol, nucleus, peroxisome	49.91	34.08
CDX80059	Canola	cytosol, nucleus, peroxisome	49.57	33.88
CDY43107	Canola	cytosol, nucleus, peroxisome	28.4	33.67
CDX92079	Canola	cytosol, nucleus, peroxisome	28.4	33.27
CDX73725	Canola	vacuole	20.31	31.3
CDY04862	Canola	cytosol, mitochondrion, plastid	19.11	30.83
CDY55405	Canola	cytosol, nucleus, plastid	19.45	30.62
CDY16313	Canola	extracellular	19.79	30.5
CDY11224	Canola	cytosol	18.59	30.25
CDX80837	Canola	cytosol, mitochondrion	18.93	30.22
CDY33283	Canola	plastid	19.79	30.1
CDX76124	Canola	mitochondrion	19.28	29.95
CDX70348	Canola	cytosol, mitochondrion	18.59	29.75
CDY10428	Canola	mitochondrion	18.59	29.75
CDX90277	Canola	cytosol, mitochondrion, nucleus	19.45	29.74
CDY02904	Canola	mitochondrion	19.11	29.68
CDY12086	Canola	cytosol, mitochondrion, nucleus	19.28	29.47
CDX70071	Canola	cytosol, mitochondrion	19.11	28.98
CDX98953	Canola	cytosol, mitochondrion	19.11	28.98
CDY51441	Canola	mitochondrion	19.11	28.68
CDX73413	Canola	mitochondrion	19.11	28.68
CDY14069	Canola	cytosol, mitochondrion	19.28	28.64
CDY05001	Canola	cytosol, mitochondrion	19.28	28.64
CDY42159	Canola	cytosol	18.42	28.23
CDY08420	Canola	cytosol, mitochondrion, plastid	18.42	28.23
CDY52665	Canola	cytosol	18.42	28.23
CDY54807	Canola	nucleus, peroxisome, plastid	18.76	27.95
CDY50535	Canola	cytosol, mitochondrion, plastid	18.59	27.91
CDX75902	Canola	plastid	18.07	27.85
CDY34992	Canola	cytosol, plastid, vacuole	17.9	27.51
CDY39026	Canola	cytosol, plastid, vacuole	17.9	27.51
CDX72438	Canola	mitochondrion	17.56	27.27
CDY49385	Canola	mitochondrion	17.04	26.47
CDY28332	Canola	mitochondrion	17.38	26.3
CDY51944	Canola	mitochondrion	17.38	26.23
CDY40818	Canola	mitochondrion	5.68	26.19
CDY70696	Canola	extracellular, peroxisome	14.46	25.93
CDY29015	Canola	cytosol	15.49	25.0
CDY51276	Canola	mitochondrion	3.44	24.1
CDX78002	Canola	vacuole	20.31	23.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:A0A078FTJ2	UniProt:A0A078FTJ2
EnsemblPlants:CDY15623	ProteinID:CDY15623	ProteinID:CDY15623.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00089812001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EE3701	SEG:seg	:	:	:

Description

BnaA08g29070DBnaA08g29070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTJ2]

Coordinates

chrLK032055:+:767853..769971

Molecular Weight (calculated)

65522.0 Da

IEP (calculated)

6.008

GRAVY (calculated)

-0.549

Length

581 amino acids

Sequence
(BLAST)

001: MGNGVTKLRT CFTGRERFRQ KDITFQLPDP LDEGLGHSFC YVRPDQTLTT SSKVHAELEE TTTTVFRTIS GASVSANAAT PLSTSLYDPY GHVDLASAAS
101: FESTTSFPSI PLQPIPKSSG DGDPNERGFL SGPIERGFMS GSLDDDGDGL DNPSSDHHHF QRSFSHGLAL RVGSKRRSLV RTIRRVISRT VSRRQNSVVA
201: PIRPEKNLKE GTLNDGVSVE SQSLQWAQGK AGEDRVHVVV SEEEHGWLFV GIYDGFNGPD APDYLLSHLY PTLHRELKDL LLWDGPHNHC ERRWRCEWDQ
301: EKQDLDRRLK EQINCRTGSR SDRLTDHKHV LHALSEALRK TEEAYLDTAD KMLEENPELA LMGSCVLVML MKGEDVYVMN VGDSRAVLGC EGDHDSSLVK
401: NLSASQLTFD HSTNVEEEVE RIRNEHPDDA RAVTNERVKG SLKVTRAFGA GFLKQPKWNN ALLEMFQIDY KGQSPYINCL PFLYHHRLSS KDRFLILSSD
501: GLYQYFTNEE AVSEVELFIT LQPEGDPAQH LVQELLFRAA KKAGLDFHEL LEIPQGERRR YHDDVSIVVI SLEGRMWKSC V

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.