Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 97.1 | 97.1 |
| AT3G12620.2 | Thale cress | mitochondrion | 93.67 | 92.21 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 93.4 | 91.47 |
| CDY52665 | Canola | cytosol | 91.03 | 91.03 |
| VIT_13s0067g03500.t01 | Wine grape | cytosol, mitochondrion, plastid | 77.04 | 77.04 |
| PGSC0003DMT400060005 | Potato | cytosol | 74.41 | 73.44 |
| Solyc05g055980.2.1 | Tomato | cytosol | 60.42 | 72.93 |
| CDX76124 | Canola | mitochondrion | 71.77 | 72.73 |
| CDX73413 | Canola | mitochondrion | 73.61 | 72.09 |
| CDY51441 | Canola | mitochondrion | 73.35 | 71.83 |
| CDY02904 | Canola | mitochondrion | 70.71 | 71.66 |
| KRG93033 | Soybean | mitochondrion | 72.82 | 71.13 |
| KRH36281 | Soybean | mitochondrion | 72.03 | 70.18 |
| GSMUA_Achr6P23480_001 | Banana | cytosol | 59.37 | 67.37 |
| GSMUA_Achr10P... | Banana | cytosol | 66.49 | 67.02 |
| GSMUA_Achr6P15470_001 | Banana | mitochondrion | 65.96 | 65.96 |
| TraesCS3A01G538500.1 | Wheat | mitochondrion | 66.49 | 65.28 |
| Os01t0976700-01 | Rice | mitochondrion | 64.64 | 65.16 |
| TraesCS3B01G604000.1 | Wheat | mitochondrion | 65.7 | 64.51 |
| TraesCS3D01G544100.1 | Wheat | mitochondrion | 65.7 | 64.51 |
| HORVU3Hr1G114160.1 | Barley | mitochondrion | 52.51 | 63.99 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 63.59 | 63.42 |
| CDY16313 | Canola | extracellular | 63.06 | 63.4 |
| HORVU3Hr1G117670.6 | Barley | mitochondrion | 65.96 | 63.29 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 63.32 | 63.16 |
| CDX73725 | Canola | vacuole | 62.27 | 62.6 |
| CDY33283 | Canola | plastid | 63.06 | 62.57 |
| CDY70696 | Canola | extracellular, peroxisome | 52.24 | 61.11 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 62.8 | 61.03 |
| CDX70348 | Canola | cytosol, mitochondrion | 58.05 | 60.61 |
| CDY11224 | Canola | cytosol | 56.99 | 60.5 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 57.26 | 60.28 |
| CDY10428 | Canola | mitochondrion | 57.52 | 60.06 |
| TraesCS7A01G386400.1 | Wheat | cytosol | 21.9 | 59.29 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 57.26 | 58.81 |
| CDX80837 | Canola | cytosol, mitochondrion | 55.67 | 57.97 |
| CDX75902 | Canola | plastid | 54.88 | 55.17 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 53.83 | 53.97 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 53.83 | 53.97 |
| CDY29015 | Canola | cytosol | 49.34 | 51.94 |
| CDY14069 | Canola | cytosol, mitochondrion | 52.77 | 51.15 |
| CDY05001 | Canola | cytosol, mitochondrion | 52.24 | 50.64 |
| CDX72438 | Canola | mitochondrion | 49.08 | 49.73 |
| CDX70071 | Canola | cytosol, mitochondrion | 50.13 | 49.61 |
| CDY49385 | Canola | mitochondrion | 48.81 | 49.47 |
| CDY28332 | Canola | mitochondrion | 49.87 | 49.22 |
| CDY51944 | Canola | mitochondrion | 49.87 | 49.09 |
| CDX98953 | Canola | cytosol, mitochondrion | 49.6 | 49.09 |
| CDY40818 | Canola | mitochondrion | 16.09 | 48.41 |
| HORVU2Hr1G009490.1 | Barley | mitochondrion | 20.05 | 48.1 |
| CDX78002 | Canola | vacuole | 61.74 | 46.89 |
| CDY51276 | Canola | mitochondrion | 9.23 | 42.17 |
| CDY40354 | Canola | cytosol | 20.58 | 32.37 |
| CDY71703 | Canola | cytosol | 13.19 | 25.0 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 27.18 | 21.02 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 27.18 | 20.77 |
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 26.65 | 19.02 |
| CDY57256 | Canola | cytosol, nucleus, peroxisome | 28.5 | 18.49 |
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 28.23 | 18.42 |
| CDY71801 | Canola | cytosol | 26.39 | 18.35 |
| CDY62569 | Canola | nucleus | 28.76 | 17.75 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 29.02 | 17.74 |
| CDY44706 | Canola | nucleus | 27.7 | 17.74 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 26.39 | 17.7 |
| CDY41610 | Canola | nucleus | 27.7 | 17.68 |
| CDY59038 | Canola | plastid | 26.65 | 17.63 |
| CDY06718 | Canola | mitochondrion, plastid | 29.02 | 17.43 |
| CDY07928 | Canola | nucleus | 29.29 | 16.77 |
| CDX73980 | Canola | nucleus | 29.29 | 16.67 |
| CDY31682 | Canola | nucleus, plastid | 28.23 | 16.09 |
| CDX84217 | Canola | nucleus, plastid | 27.7 | 15.84 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 31.93 | 14.24 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 31.93 | 14.22 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | GO:A0A078HXT8 | UniProt:A0A078HXT8 |
| EnsemblPlants:CDY42159 | ProteinID:CDY42159 | ProteinID:CDY42159.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00074343001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF358 | SMART:SM00332 | SUPFAM:SSF81606 | TMHMM:TMhelix | UniParc:UPI0004EEEB1E |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g40600DBnaC05g40600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXT8]
Coordinates
chrLK032516:-:169660..171378
Molecular Weight (calculated)
42006.4 Da
IEP (calculated)
9.533
GRAVY (calculated)
-0.277
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAPCWKRPS VKGEHSTRGD ANGRCDGLLW YKDSGNHVAG DFSMSVIQAN NLLEDHSKLE SGPVSMFDSG PQATFVGVYD GHGGPEAARF VNKHLFDNIR
101: KFTSENHGMS ASVITKAFLA TEEEFLSLVR RQWQTKPQIA SVGACCLVGI ICSGSLYIAN AGDSRVVLGR LEKAYKAVKA VQLSSEHNAS LESVREELRL
201: LHPDDPQIVV LKHKVWRVKG IIQVSRSIGD AYLKRSEFNR EPLLAKFRVP EAFQTPILRA EPAITVHKIH PEDQFLIFAS DGLWEHLSNQ EAVDIVNTNP
301: RNGIARKLIK TALREAAKKR EMRYSDLKKI DRGVRRHFHD DITVIVVFLD SHLVSKSVSR RPLISISGGG DLAGGPSTT
101: KFTSENHGMS ASVITKAFLA TEEEFLSLVR RQWQTKPQIA SVGACCLVGI ICSGSLYIAN AGDSRVVLGR LEKAYKAVKA VQLSSEHNAS LESVREELRL
201: LHPDDPQIVV LKHKVWRVKG IIQVSRSIGD AYLKRSEFNR EPLLAKFRVP EAFQTPILRA EPAITVHKIH PEDQFLIFAS DGLWEHLSNQ EAVDIVNTNP
301: RNGIARKLIK TALREAAKKR EMRYSDLKKI DRGVRRHFHD DITVIVVFLD SHLVSKSVSR RPLISISGGG DLAGGPSTT
001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
Arabidopsis Description
PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.