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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11224 Canola cytosol 89.01 90.76
CDY04862 Canola cytosol, mitochondrion, plastid 86.81 87.78
CDY10428 Canola mitochondrion 86.54 86.78
CDY40818 Canola mitochondrion 29.95 86.51
CDX70348 Canola cytosol, mitochondrion 85.71 85.95
CDY55405 Canola cytosol, nucleus, plastid 85.16 84.01
AT5G02760.1 Thale cress cytosol, mitochondrion 80.49 79.19
CDY51276 Canola mitochondrion 17.03 74.7
GSMUA_Achr6P15470_001 Banana mitochondrion 62.64 60.16
GSMUA_Achr6P23480_001 Banana cytosol 54.67 59.58
CDX76124 Canola mitochondrion 60.44 58.82
GSMUA_Achr10P... Banana cytosol 60.16 58.24
CDY02904 Canola mitochondrion 59.34 57.75
CDY42159 Canola cytosol 57.97 55.67
CDY08420 Canola cytosol, mitochondrion, plastid 57.97 55.67
HORVU3Hr1G114160.1 Barley mitochondrion 47.53 55.63
CDX73413 Canola mitochondrion 59.07 55.56
CDY51441 Canola mitochondrion 59.07 55.56
TraesCS3B01G604000.1 Wheat mitochondrion 58.79 55.44
Os01t0976700-01 Rice mitochondrion 57.14 55.32
TraesCS3A01G538500.1 Wheat mitochondrion 58.52 55.18
CDY52665 Canola cytosol 57.42 55.15
TraesCS3D01G544100.1 Wheat mitochondrion 58.24 54.92
CDX90277 Canola cytosol, mitochondrion, nucleus 56.59 54.21
CDX73725 Canola vacuole 56.04 54.11
CDY50535 Canola cytosol, mitochondrion, plastid 57.42 54.01
HORVU3Hr1G117670.6 Barley mitochondrion 58.52 53.92
CDY16313 Canola extracellular 55.77 53.85
CDY12086 Canola cytosol, mitochondrion, nucleus 55.77 53.42
CDY33283 Canola plastid 55.77 53.14
CDY54807 Canola nucleus, peroxisome, plastid 55.22 51.54
CDY70696 Canola extracellular, peroxisome 45.05 50.62
CDY34992 Canola cytosol, plastid, vacuole 50.55 48.68
CDY39026 Canola cytosol, plastid, vacuole 50.55 48.68
CDX75902 Canola plastid 50.27 48.54
TraesCS7A01G386400.1 Wheat cytosol 17.86 46.43
CDY49385 Canola mitochondrion 46.98 45.72
CDX72438 Canola mitochondrion 46.7 45.45
CDY14069 Canola cytosol, mitochondrion 48.63 45.27
CDY28332 Canola mitochondrion 46.98 44.53
CDY05001 Canola cytosol, mitochondrion 47.8 44.5
CDY51944 Canola mitochondrion 46.98 44.42
CDY29015 Canola cytosol 43.13 43.61
CDX70071 Canola cytosol, mitochondrion 45.88 43.6
CDX98953 Canola cytosol, mitochondrion 45.33 43.08
CDX78002 Canola vacuole 56.04 40.88
HORVU2Hr1G009490.1 Barley mitochondrion 17.03 39.24
CDY40354 Canola cytosol 21.98 33.2
CDY71703 Canola cytosol 14.29 26.0
CDY43107 Canola cytosol, nucleus, peroxisome 27.75 20.61
CDX92079 Canola cytosol, nucleus, peroxisome 27.2 19.96
CDY57256 Canola cytosol, nucleus, peroxisome 31.87 19.86
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 30.22 18.93
CDY71973 Canola cytosol, nucleus, peroxisome 27.47 18.83
CDY71801 Canola cytosol 27.2 18.17
CDX95140 Canola cytosol, mitochondrion, nucleus 30.49 17.9
CDY68192 Canola mitochondrion, nucleus, plastid 27.75 17.88
CDY06718 Canola mitochondrion, plastid 30.77 17.75
CDY44706 Canola nucleus 28.85 17.74
CDY59038 Canola plastid 27.75 17.63
CDY62569 Canola nucleus 29.67 17.59
CDY41610 Canola nucleus 28.57 17.51
CDY07928 Canola nucleus 29.95 16.47
CDX73980 Canola nucleus 29.95 16.37
CDY31682 Canola nucleus, plastid 29.12 15.94
CDX84217 Canola nucleus, plastid 28.57 15.69
CDX80059 Canola cytosol, nucleus, peroxisome 31.87 13.65
CDY41568 Canola cytosol, nucleus, peroxisome 31.87 13.63
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:A0A078CVR7EnsemblPlants:CDX80837
ProteinID:CDX80837ProteinID:CDX80837.1GO:GO:0003674GO:GO:0003824GO:GO:0004722GO:GO:0005488
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538GO:GO:0043169EnsemblPlantsGene:GSBRNA2T00134232001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481
InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746
PANTHER:PTHR13832PANTHER:PTHR13832:SF367SMART:SM00332SUPFAM:SSF81606UniParc:UPI0004EE429DSEG:seg
Description
BnaC03g00910D
Coordinates
chrLK031823:+:437907..439235
Molecular Weight (calculated)
40616.5 Da
IEP (calculated)
7.627
GRAVY (calculated)
-0.317
Length
364 amino acids
Sequence
(BLAST)
001: MVKPFWRSKS SPTKNNGLTW YKDHGLHAFG EFSTAMIQAN SVMEDQCQIE SGPLTFNNSA VHGTLVGVYD GHGGPEASRF IADNLFPNLK KFATEGGEVS
101: EEVMRNAFAE TDEDFLMAVK KQWRKNPPMA SVGSCCLAGV ICNGLVYIAN AGDSRAVLGR SERGGVRAVQ LSVEHNANVE SARQELWSMH PNDPNILVMK
201: HRMWRVKGII QVTKSIGDAY LKRAEFNREP LLPKYRVAED FTKPILSADP SVTVTQLKPE DEFIIFASDG LWEHLSNQEA VDIVHCSPRQ GVARRLLKAA
301: LKEAAKKREM RYSDLKEINP GVRRHFHDDI TVIVVYLDPQ MAHSQWLGFS TVNNASIIMN SSCV
Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)
001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
Arabidopsis Description
PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.