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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004495.1-P Field mustard cytosol, nucleus, peroxisome 98.94 99.06
CDX80059 Canola cytosol, nucleus, peroxisome 98.82 98.94
AT2G46920.2 Thale cress nucleus 89.31 88.78
VIT_07s0005g02390.t01 Wine grape mitochondrion, nucleus, peroxisome 65.57 68.8
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 48.88 66.14
KRG96628 Soybean cytosol, nucleus, peroxisome 67.57 64.83
CDY40354 Canola cytosol 18.33 64.73
KRH68360 Soybean cytosol, nucleus, peroxisome 67.22 64.49
GSMUA_Achr8P18740_001 Banana cytosol, nucleus, peroxisome 53.94 61.69
Os03t0372500-03 Rice cytosol, mitochondrion, nucleus, plastid 60.4 52.61
Zm00001d029297_P002 Maize nucleus 58.87 52.08
CDY71703 Canola cytosol 12.1 51.5
CDY71973 Canola cytosol, nucleus, peroxisome 31.61 50.66
CDY71801 Canola cytosol 32.43 50.64
OQU92535 Sorghum nucleus 53.23 50.5
CDY57256 Canola cytosol, nucleus, peroxisome 34.31 50.0
CDY15623 Canola cytosol, mitochondrion, nucleus, peroxisome 34.08 49.91
Zm00001d047412_P004 Maize mitochondrion 58.28 49.35
CDY06718 Canola mitochondrion, plastid 36.31 48.97
CDX95140 Canola cytosol, mitochondrion, nucleus 35.14 48.23
CDY68192 Canola mitochondrion, nucleus, plastid 31.96 48.14
CDY59038 Canola plastid 31.73 47.12
CDY62569 Canola nucleus 33.26 46.09
CDY44706 Canola nucleus 31.84 45.78
CDY31682 Canola nucleus, plastid 35.61 45.56
CDY41610 Canola nucleus 31.73 45.45
CDX84217 Canola nucleus, plastid 34.9 44.8
CDX73980 Canola nucleus 33.73 43.09
CDY07928 Canola nucleus 33.37 42.9
CDY43107 Canola cytosol, nucleus, peroxisome 20.92 36.33
CDX92079 Canola cytosol, nucleus, peroxisome 20.68 35.48
CDX76124 Canola mitochondrion 15.04 34.22
CDY02904 Canola mitochondrion 14.92 33.96
CDY04862 Canola cytosol, mitochondrion, plastid 14.22 33.61
CDX73725 Canola vacuole 14.81 33.42
CDX70348 Canola cytosol, mitochondrion 13.98 32.78
CDY16313 Canola extracellular 14.45 32.63
CDX73413 Canola mitochondrion 14.81 32.56
CDY50535 Canola cytosol, mitochondrion, plastid 14.81 32.56
CDY51441 Canola mitochondrion 14.81 32.56
CDY55405 Canola cytosol, nucleus, plastid 14.1 32.52
CDY10428 Canola mitochondrion 13.87 32.51
CDY11224 Canola cytosol 13.51 32.21
CDY33283 Canola plastid 14.45 32.2
CDY52665 Canola cytosol 14.34 32.19
CDY42159 Canola cytosol 14.22 31.93
CDX80837 Canola cytosol, mitochondrion 13.63 31.87
CDY08420 Canola cytosol, mitochondrion, plastid 14.1 31.66
CDX90277 Canola cytosol, mitochondrion, nucleus 13.87 31.05
CDY12086 Canola cytosol, mitochondrion, nucleus 13.75 30.79
CDX75902 Canola plastid 13.28 29.97
CDY54807 Canola nucleus, peroxisome, plastid 13.63 29.74
CDY39026 Canola cytosol, plastid, vacuole 13.16 29.63
CDY34992 Canola cytosol, plastid, vacuole 13.16 29.63
CDX72438 Canola mitochondrion 12.81 29.14
CDY51944 Canola mitochondrion 13.16 29.09
CDY70696 Canola extracellular, peroxisome 11.05 29.01
CDY28332 Canola mitochondrion 13.04 28.91
CDY40818 Canola mitochondrion 4.23 28.57
CDY05001 Canola cytosol, mitochondrion 13.04 28.39
CDY49385 Canola mitochondrion 12.46 28.34
CDY14069 Canola cytosol, mitochondrion 12.93 28.13
CDY51276 Canola mitochondrion 2.7 27.71
CDX70071 Canola cytosol, mitochondrion 12.46 27.68
CDY29015 Canola cytosol 11.63 27.5
CDX98953 Canola cytosol, mitochondrion 12.22 27.15
CDX78002 Canola vacuole 14.69 25.05
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.3GO:A0A078HXW8UniProt:A0A078HXW8EnsemblPlants:CDY41568
ProteinID:CDY41568ProteinID:CDY41568.1GO:GO:0003674GO:GO:0003824GO:GO:0004722GO:GO:0006464
GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00073203001InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2CInterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF301SMART:SM00332SUPFAM:SSF81606
UniParc:UPI0004EEBE27SEG:seg::::
Description
BnaC04g00540DBnaC04g00540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXW8]
Coordinates
chrLK032500:-:258841..262491
Molecular Weight (calculated)
95095.2 Da
IEP (calculated)
5.240
GRAVY (calculated)
-0.625
Length
851 amino acids
Sequence
(BLAST)
001: MGNGTSRVVG CFVPSYEKNG VDSEFLEPLD EGLGHSFCYV RPSIFESPDI TPSNSERFTI DSSTLDSETL SGSFRNEVVL DDPSFLNRHN SKGLGETTFK
101: AISGASVSAN VSTARTGNQT ALCSSDVLEP AATFESTSSF ASIPLQPLPR GGSGPLNGFM SGPLERGFAS GPLDRNNGFM SGPIEKGVMS GPLDVSDKSN
201: FSAPLSFRRR KPRFQRFMRS VSGPMRSTLA RTFSRRSGGG LSWMQRFFLH PESRVSWPGG KEGKLHGEDH PESCLESNRH LQWAHGRAGE DRVHVVLSEE
301: QGWLFIGIYD GFSGPDAPDF VMSHLYKAID KELEGLLWVY DEPSEDNPLQ PDQEPHSTTQ GNLLVPETIS EQHSKSAQEG SEEVMTDNNS SLENADGPPG
401: NLAGPGKKST RLYELLQLER WDGEEVGLKH SVSDMTNQVE DASTSGGNDP CTNENTVLDE IPNSGQLHGS KKSQISSKIR RMYQKQKSLR KKLFPWSYDW
501: HREEEGTTTC VEEKIVESSG PIRRRWSGTV DHDDVLRAMA RALESTEEAY MDMVEKSLEI NPELALMGSC VLVMLMKDQD VYVMNVGDSR AILAQERLHD
601: RHSNPGFGVE EGMGHKSRSR ESLVRMELDR ISEESPIHNL TTQISVSNKN RDVTSYRLKM RAVQLSSDHS TSVEEEVSRI RSEHPEDEQS ILKDRVKGQL
701: KVTRAFGAGF LKKPSFNEAL LEMFRVDYIG TDPYISCEPC TVHHRLTSSD RFLVLCSDGL YEYFSNEEIV AHVTWFIENV PDGDPAQYLI AELLSRAATK
801: NGMEFHDLLD IPQGDRRKYH DDVSVMVVSL EGRIWRSSGQ YYPERKPKFN R
Best Arabidopsis Sequence Match ( AT2G46920.3 )
(BLAST)
001: MGNGTSRVVG CFVPSNDKNG VDLEFLEPLD EGLGHSFCYV RPSIFESPDI TPSNSERFTI DSSTIDSETL TGSFRNDIVD DPSFLNRHNS KGLAETTFKA
101: ISGASVSANV STARTGNQMA LCSSDVLEPA ASFESTSSFA SIPLQPLPRG GSGPLNGFMS GPLERGFASG PLDRNNGFMS GPIEKGVMSG PLDVSDRSNF
201: SAPLSFRRKK PRFQRFMRSV SGPMKSTLAR TFSRRSGGLS WMHRFFLHPE TRVSWAVGKD GKLHGEDPES CLESNRNLQW AHGKAGEDRV HVVLSEEQGW
301: LFIGIYDGFS GPDAPDFVMS HLYKAIDKEL EGLLWDYEEP SEDNQLQPDQ EPPTEENMCD PESISEQHSK SVVAESEEVM IDDISSLGNT DTQIADGPPG
401: DSAGPGKKSM RLYELLQLEQ WEGEEIGLKR YGGNVALNNM TNQVENPSTS GGGAGNDPCT TDRSALDGIP NSGQRHGTKK SQISSKIRRM YQKQKSLRKK
501: LFPWSYDWHR EEGICVEEKI VESSGPIRRR WSGTVDHDAV LRAMARALES TEEAYMDMVE KSLDINPELA LMGSCVLVML MKDQDVYVMN VGDSRAILAQ
601: ERLHDRHSNP GFGNDEGIGH KSRSRESLVR IELDRISEES PIHNQATPIS VSNKNRDVTS YRLKMRAVQL SSDHSTSVEE EIWRIRSEHP EDDQSILKDR
701: VKGQLKVTRA FGAGFLKKPN FNEALLEMFQ VEYIGTDPYI TCEPCTVHHR LTSSDRFMVL SSDGLYEYFS NEEVVAHVTW FIENVPEGDP AQYLIAELLS
801: RAATKNGMEF HDLLDIPQGD RRKYHDDVSV MVVSLEGRIW RSSGQYYPER KQKFNR
Arabidopsis Description
POLProtein phosphatase 2C 32 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWN7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.